RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 SDHAP31040 664 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 CDAP32320 146 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 RPS6KA3P51812 740 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 C1orf94Q6P1W5 598 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 VHLLQ6RSH7 139 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 LRRC18Q8N456 261 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 GNPDA2Q8TDQ7 276 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 SLC7A6OSQ96CW6 309 aaPredicted RBP20.35■□□□□ 0.85
SNF8-217ENST00000576353 C1orf198Q9H425 327 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 DLL4Q9NR61 685 aa20.35■□□□□ 0.85
SNF8-217ENST00000576353 SLC22A23A1A5C7 686 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 PRSS37A4D1T9 235 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 AQP12BA6NM10 295 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 OR4A8P0C604 315 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 RAP2AP10114 183 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 ZNF35P13682 527 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 APEHP13798 732 aaKnown RBP20.34■□□□□ 0.85
SNF8-217ENST00000576353 HOXB6P17509 224 aaKnown RBP20.34■□□□□ 0.85
SNF8-217ENST00000576353 NR4A1P22736 598 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 PLP2Q04941 152 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 DAG1Q14118 895 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 RAB35Q15286 201 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 ADIPOQQ15848 244 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 RFX4Q33E94 735 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 MESTQ5EB52 335 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 FAM27BQ5VT28 67 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 PGM2L1Q6PCE3 622 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 THSD4Q6ZMP0 1018 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 AQP12AQ8IXF9 295 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 FANK1Q8TC84 345 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 FBXO17Q96EF6 278 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 CCNB1IP1Q9NPC3 277 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 IL20RAQ9UHF4 553 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 IER3IP1Q9Y5U9 82 aa20.34■□□□□ 0.85
SNF8-217ENST00000576353 TEP1Q99973 2627 aaKnown RBP20.34■□□□□ 0.85
SNF8-217ENST00000576353 TEX13CA0A0J9YWL9 993 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 B9A039 149 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 H7C1C5 153 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 H7C417 338 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 DNAJC8O75937 253 aaPredicted RBP20.33■□□□□ 0.85
SNF8-217ENST00000576353 IGHV4-39P01824 125 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 SLC6A6P31641 620 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 GSSP48637 474 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 FXYD6P3P58550 94 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 SNRPD2P62316 118 aaKnown RBP20.33■□□□□ 0.85
SNF8-217ENST00000576353 LCN6P62502 163 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 GALK2Q01415 458 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 BNIP1Q12981 228 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 TSPAN31Q12999 210 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 KRR1Q13601 381 aaKnown RBP20.33■□□□□ 0.85
SNF8-217ENST00000576353 SWI5Q1ZZU3 235 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 MST1LQ2TV78 715 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 OR2T5Q6IEZ7 315 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 ADCK1Q86TW2 530 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 OR2T29Q8NH02 315 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 NABP1Q96AH0 204 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 C18orf12Q96KH6 178 aa20.33■□□□□ 0.85
SNF8-217ENST00000576353 FBXO9Q9UK97 447 aaPredicted RBP20.33■□□□□ 0.85
SNF8-217ENST00000576353 IQCMA0A1B0GVH7 501 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 CCNB2O95067 398 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 TXNDC12O95881 172 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 MMP7P09237 267 aaPredicted RBP20.32■□□□□ 0.84
SNF8-217ENST00000576353 THBS4P35443 961 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 RASSF2P50749 326 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 SNTB2Q13425 540 aaKnown RBP20.32■□□□□ 0.84
SNF8-217ENST00000576353 EFNB3Q15768 340 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 KRT80Q6KB66 452 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 PGBD2Q6P3X8 592 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 FOXL2NBQ6ZUU3 175 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 ZNF584Q8IVC4 421 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 SLC30A7Q8NEW0 376 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 OR4C15Q8NGM1 316 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 OR1J2Q8NGS2 313 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 RASD2Q96D21 266 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 LRMDAQ9H2I8 198 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 OR52D1Q9H346 318 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 REEP1Q9H902 201 aa20.32■□□□□ 0.84
SNF8-217ENST00000576353 GDF2Q9UK05 429 aaPredicted RBP20.32■□□□□ 0.84
SNF8-217ENST00000576353 A0A1W2PPL8 197 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 SOCS2O14508 198 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 IMPA2O14732 288 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 NDUFS7O75251 213 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 ATP5HO75947 161 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 HSF2Q03933 536 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 CLEC12BQ2HXU8 276 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 ERMAPQ96PL5 475 aaPredicted RBP20.31■□□□□ 0.84
SNF8-217ENST00000576353 CHID1Q9BWS9 393 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 SAMHD1Q9Y3Z3 626 aaKnown RBP20.31■□□□□ 0.84
SNF8-217ENST00000576353 CMAHPQ9Y471 501 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 MED13LQ71F56 2210 aa20.31■□□□□ 0.84
SNF8-217ENST00000576353 ARPC3O15145 178 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 CST2P09228 141 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 MSR1P21757 451 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 LAP3P28838 519 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 GLRXP35754 106 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 PCBD1P61457 104 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 RPS23P62266 143 aaKnown RBP20.3■□□□□ 0.84
SNF8-217ENST00000576353 FLOT2Q14254 428 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 GK3PQ14409 553 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 TBC1D28Q2M2D7 210 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms