RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 BAALCQ8WXS3 180 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 CDKL2Q92772 493 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 FGF14Q92915 247 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 TMEM54Q969K7 222 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 PIK3IP1Q96FE7 263 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 CENPNQ96H22 339 aaPredicted RBP1.63□□□□□ -2.15
CHD3-217ENST00000574022 NAF1Q96HR8 494 aaKnown RBP1.63□□□□□ -2.15
CHD3-217ENST00000574022 PSMB7Q99436 277 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 OPRPNQ99935 248 aaPredicted RBP1.63□□□□□ -2.15
CHD3-217ENST00000574022 RIOK2Q9BVS4 552 aaKnown RBP1.63□□□□□ -2.15
CHD3-217ENST00000574022 CALN1Q9BXU9 219 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 FRMD8P1Q9BZ68 369 aaPredicted RBP1.63□□□□□ -2.15
CHD3-217ENST00000574022 C20orf85Q9H1P6 137 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 SYT4Q9H2B2 425 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 TMEM38AQ9H6F2 299 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 CLN6Q9NWW5 311 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 CALYQ9NYX4 217 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 STMN3Q9NZ72 180 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 ENPP5Q9UJA9 477 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 POFUT2Q9Y2G5 429 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 ZNF256Q9Y2P7 627 aaPredicted RBP1.63□□□□□ -2.15
CHD3-217ENST00000574022 UGT2A1Q9Y4X1 527 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 ATP6V1DQ9Y5K8 247 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 STYXL1Q9Y6J8 313 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 V9GYY9 64 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 FER1L5A0AVI2 2057 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 MROH7Q68CQ1 1323 aa1.63□□□□□ -2.15
CHD3-217ENST00000574022 IGHV3OR16-13A0A075B7E8 117 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 IGHV3OR16-10A0A075B7F0 116 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 IGHV7-81A0A0B4J1V7 117 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 KIR2DL5BA0A0G2JN68 375 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 KIR2DL5BA0A0G2JPC4 375 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 A0A1B0GU03 582 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 PSMB11A5LHX3 300 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ZNF726A6NNF4 738 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SHISA9B4DS77 424 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 C12orf77C9JDV5 145 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 H3BN98 237 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 AGPAT2O15120 278 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 HCRTR1O43613 425 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CALUO43852 315 aaPredicted RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 GALR3O60755 368 aaPredicted RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 DPM1O60762 260 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ZNF253O75346 499 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 LYPLA1O75608 230 aaPredicted RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 CBR3O75828 277 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SC5DO75845 299 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SNAPINO95295 136 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CST4P01036 141 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 TACSTD2P09758 323 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CFC1BP0CG36 223 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CFC1P0CG37 223 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CCDC166P0CW27 439 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CT45A6P0DMU7 189 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CT45A5P0DMU8 189 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CT45A7P0DMV0 189 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CALM1P0DP23 149 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CALM2P0DP24 149 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CALM3P0DP25 149 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 FOLR1P15328 257 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 FMO3P31513 532 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ARR3P36575 388 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CRATP43155 626 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 VDAC2P45880 294 aaPredicted RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 CSNK1DP48730 415 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 DLX1P56177 255 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CLDN6P56747 220 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SKP1P63208 163 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CSNK1G2P78368 415 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ACVR1Q04771 509 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 PAX8Q06710 450 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 UNC119Q13432 240 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ATP6AP1Q15904 470 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 PRR4Q16378 134 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 KCTD19Q17RG1 926 aaPredicted RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 CT45A1Q5HYN5 189 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 PAGE2BQ5JRK9 111 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CCNJQ5T5M9 372 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 TPTE2P1Q5T6R2 138 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ZNF658Q5TYW1 1059 aaPredicted RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 C1orf146Q5VVC0 180 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 C12orf54Q6X4T0 127 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ZNF620Q6ZNG0 422 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 PEX26Q7Z412 305 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 FAM220AQ7Z4H9 259 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CYP4Z1Q86W10 505 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 UNC93AQ86WB7 457 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 NAXDQ8IW45 347 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 VKORC1L1Q8N0U8 176 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SPAG16Q8N0X2 631 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 KIR2DL5AQ8N109 375 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 MREGQ8N565 214 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 TMEM252Q8N6L7 170 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 Q8N9P0 234 aaPredicted RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 OR7G1Q8NGA0 311 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 OR51S1Q8NGJ8 323 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 OR2A1Q8NGT9 310 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 KIR2DL5BQ8NHK3 375 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 CT45A3Q8NHU0 189 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SPATA3Q8NHX4 192 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms