RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 RIF1Q5UIP0 2472 aaKnown RBP17.32■□□□□ 0.36
RPAIN-210ENST00000571613 SC5DO75845 299 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 ARL6IP5O75915 188 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 ABHD16AO95870 558 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 MYL9P24844 172 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 LAP3P28838 519 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 CLDN17P56750 224 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 CDC20Q12834 499 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 SLC17A1Q14916 467 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 HIST3H3Q16695 136 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 ACSM3Q53FZ2 586 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 YIF1BQ5BJH7 314 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 GALNTL5Q7Z4T8 443 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 SLC22A16Q86VW1 577 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 TPRA1Q86W33 373 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 OR9K2Q8NGE7 335 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 SCMH1Q96GD3 660 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 ADGRG7Q96K78 797 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 PAQR5Q9NXK6 330 aaPredicted RBP17.32■□□□□ 0.36
RPAIN-210ENST00000571613 KLHDC2Q9Y2U9 406 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 ZNF281Q9Y2X9 895 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 GRIP1Q9Y3R0 1128 aa17.32■□□□□ 0.36
RPAIN-210ENST00000571613 ACOT7O00154 380 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 TAF4O00268 1085 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 ZNF254O75437 659 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 UPK3AO75631 287 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 ZNF432O94892 652 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 GLSO94925 669 aaPredicted RBP17.31■□□□□ 0.36
RPAIN-210ENST00000571613 OR8G3PP0DMU2 310 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 SDHBP21912 280 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 MEOX1P50221 254 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 CLDN20P56880 219 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 FMODQ06828 376 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 RASGEF1BQ0VAM2 473 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 ALKBH1Q13686 389 aaKnown RBP17.31■□□□□ 0.36
RPAIN-210ENST00000571613 DEGS2Q6QHC5 323 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 CEACAM19Q7Z692 300 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 ZFP62Q8NB50 900 aaPredicted RBP17.31■□□□□ 0.36
RPAIN-210ENST00000571613 NSMAFQ92636 917 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 THRSPQ92748 146 aa17.31■□□□□ 0.36
RPAIN-210ENST00000571613 CNOT1A5YKK6 2376 aaKnown RBP17.31■□□□□ 0.36
RPAIN-210ENST00000571613 TRABD2BA6NFA1 517 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 MAGEB4O15481 346 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-210ENST00000571613 LRRTM2O43300 516 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 RAMP1O60894 148 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 GPANK1O95872 356 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 GUCA1AP43080 201 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-210ENST00000571613 ZNF45Q02386 682 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 MXD1Q05195 221 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 EIF2B1Q14232 305 aaKnown RBP17.3■□□□□ 0.36
RPAIN-210ENST00000571613 BCL2A1Q16548 175 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 ZNF766Q5HY98 468 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 FDX2Q6P4F2 183 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 SLC25A47Q6Q0C1 308 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 KRT77Q7Z794 578 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 HES7Q9BYE0 225 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 TPK1Q9H3S4 243 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 ACKR4Q9NPB9 350 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 ALPK2Q86TB3 2170 aa17.3■□□□□ 0.36
RPAIN-210ENST00000571613 PSMB10P40306 273 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 EIF1AXP47813 144 aaKnown RBP17.29■□□□□ 0.36
RPAIN-210ENST00000571613 CSNK1A1P48729 337 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 CCL11P51671 97 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 RIDAP52758 137 aaKnown RBP17.29■□□□□ 0.36
RPAIN-210ENST00000571613 HNRNPA0Q13151 305 aaKnown RBP17.29■□□□□ 0.36
RPAIN-210ENST00000571613 INAQ16352 499 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 MEP1BQ16820 701 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 IGFL2Q6UWQ7 119 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 MEIOBQ8N635 442 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 TMEM251Q8N6I4 163 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 OR52N5Q8NH56 324 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 OR10D3Q8NH80 312 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 MCHR2Q969V1 340 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 CEP19Q96LK0 163 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 ABHD6Q9BV23 337 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 SRXN1Q9BYN0 137 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 COMMD4Q9H0A8 199 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 SLC24A3Q9HC58 644 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 GLTPQ9NZD2 209 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 RCE1Q9Y256 329 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 B3GNT3Q9Y2A9 372 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 TMEM212A6NML5 194 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 PRR32B1ATL7 298 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 PSMD9O00233 223 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 SMAD9O15198 467 aaKnown RBP17.29■□□□□ 0.36
RPAIN-210ENST00000571613 CALRP27797 417 aaKnown RBP17.29■□□□□ 0.36
RPAIN-210ENST00000571613 CD40LGP29965 261 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 CCR9P51686 369 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 ZNF133P52736 654 aaPredicted RBP17.29■□□□□ 0.36
RPAIN-210ENST00000571613 SLC10A1Q14973 349 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 ZMAT1Q5H9K5 638 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 C16orf87Q6PH81 154 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 FAM109AQ8N4B1 249 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 OR6N1Q8NGY5 312 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 RNF128Q8TEB7 428 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 DCBLD2Q96PD2 775 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 UCN2Q96RP3 112 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 BARHL1Q9BZE3 327 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 ELOVL3Q9HB03 270 aa17.29■□□□□ 0.36
RPAIN-210ENST00000571613 SMURF1Q9HCE7 757 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms