RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TRGV8A0A0C4DH27 118 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ATP6AP2A0A1C7CYW4 349 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 OR6C70A6NIJ9 312 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 CCL21O00585 134 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 BCKDKO14874 412 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 SCAMP2O15127 329 aaKnown RBP3.35□□□□□ -1.87
NUP88-202ENST00000570937 HDAC3O15379 428 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 CFLARO15519 480 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 LRRTM2O43300 516 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ADAM20O43506 726 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 AHCYL1O43865 530 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 HCN1O60741 890 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 SLC19A2O60779 497 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 TBX19O60806 448 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 REM1O75628 298 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ATP6AP2O75787 350 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 TRAPPC6AO75865 159 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 LRATO95237 230 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 STSP08842 583 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 HOXD4P09016 255 aaPredicted RBP3.35□□□□□ -1.87
NUP88-202ENST00000570937 BCKDHAP12694 445 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 GP1BBP13224 206 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 HPGDP15428 266 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 LBPP18428 481 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 SDC1P18827 310 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 GPX3P22352 226 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 MPZP25189 248 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 IL12BP29460 328 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 EMDP50402 254 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 SMSP52788 366 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 LRRC74AQ0VAA2 488 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 BST1Q10588 318 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 EXOSC7Q15024 291 aaKnown RBP3.35□□□□□ -1.87
NUP88-202ENST00000570937 EBPQ15125 230 aaKnown RBP3.35□□□□□ -1.87
NUP88-202ENST00000570937 TOMM20Q15388 145 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 HYAL4Q2M3T9 481 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 TRMT12Q53H54 448 aaKnown RBP3.35□□□□□ -1.87
NUP88-202ENST00000570937 PRR30Q53SZ7 412 aaPredicted RBP3.35□□□□□ -1.87
NUP88-202ENST00000570937 XKR7Q5GH72 579 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 C6orf136Q5SQH8 315 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 WLSQ5T9L3 541 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ANXA8L1Q5VT79 327 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 IL23RQ5VWK5 629 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 MFSD12Q6NUT3 480 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 SLC30A6Q6NXT4 461 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ZCCHC12Q6PEW1 402 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 XKRXQ6PP77 449 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 TMEM107Q6UX40 140 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 C16orf47Q6ZP98 133 aaPredicted RBP3.35□□□□□ -1.87
NUP88-202ENST00000570937 Q6ZRP5 223 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 SPATA19Q7Z5L4 167 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 SLC34A3Q8N130 599 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 LYG1Q8N1E2 194 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 OR2L13Q8N349 312 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 LIX1Q8N485 282 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ZNF781Q8N8C0 355 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ZNF321PQ8N8H1 164 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 CDRT4Q8N9R6 151 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 THAP8Q8NA92 274 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 OR2M7Q8NG81 312 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 OR13C3Q8NGS6 347 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 OR9A2Q8NGT5 310 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 MGARPQ8TDB4 240 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 UCN3Q969E3 161 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ADIPOR1Q96A54 375 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 TLCD1Q96CP7 247 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 FCRL1Q96LA6 429 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ATP6V1G3Q96LB4 118 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ZNF597Q96LX8 424 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 JSRP1Q96MG2 331 aaPredicted RBP3.35□□□□□ -1.87
NUP88-202ENST00000570937 ZNF681Q96N22 645 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 AMDHD1Q96NU7 426 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 COL21A1Q96P44 957 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 TSSK3Q96PN8 268 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 BTBD9Q96Q07 612 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ZBTB18Q99592 522 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 PKP2Q99959 881 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 DOHHQ9BU89 302 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 TTTY12Q9BZ98 90 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 DPY30Q9C005 99 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 HOXD1Q9GZZ0 328 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 TUBB1Q9H4B7 451 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 GLIPR2Q9H4G4 154 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 EXO5Q9H790 373 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 PTGES2Q9H7Z7 377 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 METTL7AQ9H8H3 244 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 MEAF6Q9HAF1 191 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 QPCTLQ9NXS2 382 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 HAO2Q9NYQ3 351 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 MAT2BQ9NZL9 334 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 KLRF1Q9NZS2 232 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 BAIAP2L1Q9UHR4 511 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ATP6V1HQ9UI12 483 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ZNF639Q9UID6 485 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 NTNG1Q9Y2I2 539 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 CCL27Q9Y4X3 112 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 SPTA1P02549 2419 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ZNF462Q96JM2 2506 aa3.35□□□□□ -1.87
NUP88-202ENST00000570937 ATRXP46100 2492 aa3.34□□□□□ -1.87
NUP88-202ENST00000570937 SCN2AQ99250 2005 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms