RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LAMP5Q9UJQ1 280 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 RPH3AQ9Y2J0 694 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PCDHGA9Q9Y5G4 932 aaKnown RBP4.83□□□□□ -1.64
SF3B3-213ENST00000569687 PCDHGA5Q9Y5G8 931 aa4.83□□□□□ -1.64
SF3B3-213ENST00000569687 ADAMTS20P59510 1910 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 TRBV23-1A0A0A0MS06 115 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 TRAV20A0A0B4J274 112 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 A0A0G2JMP0 313 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 A0A0X1KG70 313 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 MEIOCA2RUB1 952 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SMIM30A4D0T7 59 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 TVP23AA6NH52 213 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 PRR33A8MZF0 331 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 C9J4A7 227 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 C11orf98E9PRG8 122 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 AGRPO00253 132 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 LYRM1O43325 122 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SSX4O60224 188 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLC16A7O60669 478 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLC43A1O75387 559 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SRSF10O75494 262 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 KHDRBS3O75525 346 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 AVPP01185 164 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ISG15P05161 165 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 EIF4EP06730 217 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 RAB40ALP0C0E4 278 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR8G3PP0DMU2 310 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 COX6A1P12074 109 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 CCL4P13236 92 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ICAM2P13598 275 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 CTLA4P16410 223 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF28P17035 718 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 CSRP1P21291 193 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 AZGP1P25311 298 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 DPP4P27487 766 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 DCTDP32321 178 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 GNALP38405 381 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 DDOSTP39656 456 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 MAP2K3P46734 347 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 EIF2B2P49770 351 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 MMP15P51511 669 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 P2RY4P51582 365 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 RAG2P55895 527 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 HSF1Q00613 529 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 GLO1Q04760 184 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 PUDPQ08623 228 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 CD300CQ08708 224 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 TAB1Q15750 504 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 KCNMB1Q16558 191 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLC36A2Q495M3 483 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 PLA1AQ53H76 456 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 THEM4Q5T1C6 240 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF468Q5VIY5 522 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR5M10Q6IEU7 315 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 H3F3CQ6NXT2 135 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 FAM199XQ6PEV8 388 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 KCTD18Q6PI47 426 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 DNM1P34Q6PK57 102 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 FAM198BQ6UWH4 519 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 LYPD4Q6UWN0 246 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 LRRN1Q6UXK5 716 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 STAC2Q6ZMT1 411 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 DNM1P46Q6ZS02 220 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLC35D2Q76EJ3 337 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 RHOUQ7L0Q8 258 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 NDUFAF7Q7L592 441 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 DPY19L4Q7Z388 723 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 LRRTM1Q86UE6 522 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 AKAP14Q86UN6 197 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 PLCZ1Q86YW0 608 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 LIX1LQ8IVB5 337 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 GHDCQ8N2G8 530 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 PRSS35Q8N3Z0 413 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 WDSUB1Q8N9V3 476 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLC26A10Q8NG04 563 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR4M2Q8NGB6 313 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR10G3Q8NGC4 313 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR13C5Q8NGS8 318 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR2I1PQ8NGU4 316 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR5H6Q8NGV6 325 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR6N2Q8NGY6 317 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR6F1Q8NGZ6 308 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 TRMT10AQ8TBZ6 339 aaKnown RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 GPR148Q8TDV2 347 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 C15orf40Q8WUR7 153 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SLC25A43Q8WUT9 341 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-213ENST00000569687 THEM6Q8WUY1 208 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 RAB40AQ8WXH6 277 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 NSMAFQ92636 917 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 MR1Q95460 341 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 TRIM63Q969Q1 353 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 RELTQ969Z4 430 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ZBTB8AQ96BR9 441 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 ARL5BQ96KC2 179 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 SGCZQ96LD1 299 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 C4orf45Q96LM5 186 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OXGR1Q96P68 337 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 RBP7Q96R05 134 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 OR14A2Q96R54 314 aa4.82□□□□□ -1.64
SF3B3-213ENST00000569687 GFI1Q99684 422 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms