RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 LINC00471Q8N535 108 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 CLDN22Q8N7P3 220 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 GNPDA2Q8TDQ7 276 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 HTRA1Q92743 480 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 Q96MF0 132 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF570Q96NI8 536 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 GPA33Q99795 319 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 BDH2Q9BUT1 245 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 CACNG6Q9BXT2 260 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 TRIM15Q9C019 465 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 UGT2A1Q9Y4X1 527 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 LYVE1Q9Y5Y7 322 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 PMF1-BGLAPU3KQ54 211 aa11.97□□□□□ -0.49
HERPUD1-218ENST00000569569 AQP12BA6NM10 295 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 DNAJC8O75937 253 aaPredicted RBP11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 PTHP01270 115 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 RAP2AP10114 183 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF35P13682 527 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 FPR3P25089 353 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 SDHAP31040 664 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 CDAP32320 146 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 SERPINF1P36955 418 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 GSSP48637 474 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 RPS6KA3P51812 740 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 BNIP1Q12981 228 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 DAG1Q14118 895 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 RAB35Q15286 201 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 SGCAQ16586 387 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 SWI5Q1ZZU3 235 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 MST1LQ2TV78 715 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 RFX4Q33E94 735 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 MESTQ5EB52 335 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 FAM27BQ5VT28 67 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 PGM2L1Q6PCE3 622 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 VHLLQ6RSH7 139 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF584Q8IVC4 421 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 AQP12AQ8IXF9 295 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 NABP1Q96AH0 204 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 FBXO17Q96EF6 278 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 OR52D1Q9H346 318 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 ZNF442Q9H7R0 627 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 DLL4Q9NR61 685 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 IL20RAQ9UHF4 553 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 SPEF1Q9Y4P9 236 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 IER3IP1Q9Y5U9 82 aa11.96□□□□□ -0.49
HERPUD1-218ENST00000569569 TEX13CA0A0J9YWL9 993 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 SLC22A23A1A5C7 686 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 PRSS37A4D1T9 235 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 B9A039 149 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 H7C1C5 153 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 TXNDC12O95881 172 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 MMP7P09237 267 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 OR4A8P0C604 315 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 APEHP13798 732 aaKnown RBP11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 NR4A1P22736 598 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 THBS4P35443 961 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 RASSF2P50749 326 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 LCN6P62502 163 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 PLP2Q04941 152 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 TSPAN31Q12999 210 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 KRR1Q13601 381 aaKnown RBP11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 ADIPOQQ15848 244 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 OR2T5Q6IEZ7 315 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 KRT80Q6KB66 452 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 PGBD2Q6P3X8 592 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 FOXL2NBQ6ZUU3 175 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 OR2T29Q8NH02 315 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 RASD2Q96D21 266 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 C18orf12Q96KH6 178 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 C1orf198Q9H425 327 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 BARX1Q9HBU1 254 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 CCNB1IP1Q9NPC3 277 aa11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 GDF2Q9UK05 429 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-218ENST00000569569 YLPM1P49750 1951 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 IQCMA0A1B0GVH7 501 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 H7C417 338 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 SOCS2O14508 198 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 IMPA2O14732 288 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 ARPC3O15145 178 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 GSC2O15499 205 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 NDUFS7O75251 213 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 ATP5HO75947 161 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 CCNB2O95067 398 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 CST2P09228 141 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 HOXB6P17509 224 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 SLC6A6P31641 620 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 GLRXP35754 106 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 SNRPD2P62316 118 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 GALK2Q01415 458 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 SNTB2Q13425 540 aaKnown RBP11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 EFNB3Q15768 340 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 CLEC12BQ2HXU8 276 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 ADCK1Q86TW2 530 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 SLC30A7Q8NEW0 376 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 OR4C15Q8NGM1 316 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 OR1J2Q8NGS2 313 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 FANK1Q8TC84 345 aa11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 ERMAPQ96PL5 475 aaPredicted RBP11.94□□□□□ -0.5
HERPUD1-218ENST00000569569 REEP1Q9H902 201 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms