RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 RBM4Q9BWF3 364 aaKnown RBP13.19□□□□□ -0.3
NME3-211ENST00000568561 NKIRAS2Q9NYR9 191 aa13.19□□□□□ -0.3
NME3-211ENST00000568561 LEF1Q9UJU2 399 aaPredicted RBP13.19□□□□□ -0.3
NME3-211ENST00000568561 IGKV1D-43A0A0B4J1Z2 117 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 A0A1W2PRG6 482 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 ISPDA4D126 451 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 ZSCAN5BA6NJL1 495 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 ERLIN1O75477 346 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 TRMUO75648 421 aaKnown RBP13.18□□□□□ -0.3
NME3-211ENST00000568561 IGHV1-46P01743 117 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 IGHV3-13P01766 116 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 ANPEPP15144 967 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 ZNF32P17041 273 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 TNFRSF1BP20333 461 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 AQP2P41181 271 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 ATP4BP51164 291 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 ZNF81P51508 661 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 CRYBA2P53672 197 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 UGT2B15P54855 530 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 LCN2P80188 198 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 TEKQ02763 1124 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 HFEQ30201 348 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 SPRNQ5BIV9 151 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 RFPL4BQ6ZWI9 263 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 USP43Q70EL4 1123 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 DPPA2Q7Z7J5 298 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 BPIFB2Q8N4F0 458 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 AKR7LQ8NHP1 331 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 MOSPD2Q8NHP6 518 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 CCL17Q92583 94 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 ZMYND19Q96E35 227 aaPredicted RBP13.18□□□□□ -0.3
NME3-211ENST00000568561 MPP4Q96JB8 637 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 CGREF1Q99674 301 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 GAL3ST1Q99999 423 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 SUCNR1Q9BXA5 334 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 MRPL13Q9BYD1 178 aaKnown RBP13.18□□□□□ -0.3
NME3-211ENST00000568561 LRMDAQ9H2I8 198 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 UBAP1Q9NZ09 502 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 UGT2A1Q9Y4X1 527 aa13.18□□□□□ -0.3
NME3-211ENST00000568561 LOC100509620A0A075B734 347 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 SHOX2O60902 331 aaPredicted RBP13.17□□□□□ -0.3
NME3-211ENST00000568561 PTHP01270 115 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 MT-ND5P03915 603 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 ACADSP16219 412 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 STOMP27105 288 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 ERVK-25P63136 954 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 MMEL1Q495T6 779 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 AWAT1Q58HT5 328 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 THEM4Q5T1C6 240 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 PATL1Q86TB9 770 aaKnown RBP13.17□□□□□ -0.3
NME3-211ENST00000568561 NKAIN4Q8IVV8 208 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 ZDHHC22Q8N966 263 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 SLC25A40Q8TBP6 338 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 SLC26A7Q8TE54 656 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 TMEM255BQ8WV15 326 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 GEMIN6Q8WXD5 167 aaKnown RBP13.17□□□□□ -0.3
NME3-211ENST00000568561 NSMAFQ92636 917 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 RAB1CQ92928 201 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 NABP1Q96AH0 204 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 ELMOD3Q96FG2 381 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 TIMD4Q96H15 378 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 SEPHS2Q99611 448 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 SLC19A3Q9BZV2 496 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 CCNB1IP1Q9NPC3 277 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 C20orf141Q9NUB4 165 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 DCAF16Q9NXF7 216 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 OPN4Q9UHM6 478 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 NDUFAF1Q9Y375 327 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 PPIAL4AQ9Y536 164 aa13.17□□□□□ -0.3
NME3-211ENST00000568561 C5orf49A4QMS7 147 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 ANGPT2O15123 496 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 KCNAB3O43448 404 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 MGRN1O60291 552 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 PRSS23O95084 383 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 H2AFXP16104 143 aaPredicted RBP13.16□□□□□ -0.3
NME3-211ENST00000568561 FUT1P19526 365 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 GCH1P30793 250 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 PCGF2P35227 344 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 MMP15P51511 669 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
NME3-211ENST00000568561 NFYCQ13952 458 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 SGCAQ16586 387 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 NRN1LQ496H8 165 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 C10orf128Q5T292 105 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 TEX29Q8N6K0 151 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 CLDN22Q8N7P3 220 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 OR10A6Q8NH74 314 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 NANPQ8TBE9 248 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 HDAC2Q92769 488 aaKnown RBP13.16□□□□□ -0.3
NME3-211ENST00000568561 MARS2Q96GW9 593 aaKnown RBP13.16□□□□□ -0.3
NME3-211ENST00000568561 POM121L2Q96KW2 1035 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 C1QTNF5Q9BXJ0 243 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 OR2J1Q9GZK6 312 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 PCDHAC1Q9H158 963 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 C7orf69Q9H7B7 122 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 KAT8Q9H7Z6 458 aaKnown RBP13.16□□□□□ -0.3
NME3-211ENST00000568561 NANOGQ9H9S0 305 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 SIAEQ9HAT2 523 aa13.16□□□□□ -0.3
NME3-211ENST00000568561 INIPQ9NRY2 104 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms