RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	RPS23	P62266	143 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	MRPS34	P82930	218 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	VLDLR	P98155	873 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	SGCA	Q16586	387 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	FXN	Q16595	210 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	TMEM249	Q2WGJ8	235 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	ALG10	Q5BKT4	473 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	THEM4	Q5T1C6	240 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	C10orf128	Q5T292	105 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	GLYAT	Q6IB77	296 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	TBPL2	Q6SJ96	375 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF730	Q6ZMV8	503 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	MEX3D	Q86XN8	651 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	PRIMA1	Q86XR5	153 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	HIPK1	Q86Z02	1210 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF584	Q8IVC4	421 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	NRM	Q8IXM6	262 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	OFCC1	Q8IZS5	231 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZCCHC24	Q8N2G6	241 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	LRRC18	Q8N456	261 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	RBM15B	Q8NDT2	890 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC30A7	Q8NEW0	376 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	NOXO1	Q8NFA2	376 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	OR1J2	Q8NGS2	313 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	OR51A7	Q8NH64	312 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	FNDC8	Q8TC99	324 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	UBASH3B	Q8TF42	649 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	ACOT11	Q8WXI4	607 aa	Predicted RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM162A	Q96A26	154 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	MRPL24	Q96A35	216 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	NSL1	Q96IY1	281 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	HSH2D	Q96JZ2	352 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	PIMREG	Q9BSJ6	248 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	MRPL37	Q9BZE1	423 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	LRMDA	Q9H2I8	198 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	MS4A5	Q9H3V2	200 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	C1orf198	Q9H425	327 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	NMNAT1	Q9HAN9	279 aa	Predicted RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	SMURF2	Q9HAU4	748 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	CDH20	Q9HBT6	801 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	DYNLRB1	Q9NP97	96 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	SPAG4	Q9NPE6	437 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	MAN2C1	Q9NTJ4	1040 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	ADA2	Q9NZK5	511 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	REV1	Q9UBZ9	1251 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC7A8	Q9UHI5	535 aa		5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF346	Q9UL40	294 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM32A	Q9Y421	112 aa	Known RBP	5.96	□□□□□ -1.46
SF3B3-209	ENST00000567635	TRAV27	A0A087WT01	109 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635		A0A087WUU8	490 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635		A0A1W2PRQ8	180 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635		A6NIZ1	184 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	ANKRD65	E5RJM6	399 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	AHCYL1	O43865	530 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	DNAJC8	O75937	253 aa	Predicted RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	PRSS23	O95084	383 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC2A10	O95528	541 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	STAMBP	O95630	424 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	IGHM	P01871	453 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	IGFBP1	P08833	259 aa	Predicted RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	MMP7	P09237	267 aa	Predicted RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	T-ENOL	P0DO92	83 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	IGHV4-31	P0DP07	118 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	RHCE	P18577	417 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	FUT4	P22083	530 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	GIF	P27352	417 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	RAD52	P43351	418 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC9A3	P48764	834 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	GZMK	P49863	264 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	RASSF2	P50749	326 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	SELENOV	P59797	346 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	RAP1B	P61224	184 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	RAP1A	P62834	184 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	HSF2	Q03933	536 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	CD47	Q08722	323 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	TOP3A	Q13472	1001 aa	Predicted RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	FHL1	Q13642	323 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	DGCR6	Q14129	220 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	GGTLC2	Q14390	218 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	MSMP	Q1L6U9	139 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	TBC1D28	Q2M2D7	210 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZBED5	Q49AG3	693 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	IQCC	Q4KMZ1	466 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM27B	Q5VT28	67 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	FAM205BP	Q63HN1	556 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	PODNL1	Q6PEZ8	512 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	SLC25A47	Q6Q0C1	308 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	TMPRSS11F	Q6ZWK6	438 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	MBOAT2	Q6ZWT7	520 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	TSEN54	Q7Z6J9	526 aa	Known RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	LRP11	Q86VZ4	500 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	ZNF786	Q8N393	782 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	ARIH2OS	Q8N7S6	290 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	LRRC75A	Q8NAA5	344 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	C11orf40	Q8WZ69	217 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	NSMAF	Q92636	917 aa		5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	HDAC2	Q92769	488 aa	Known RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	NMD3	Q96D46	503 aa	Known RBP	5.95	□□□□□ -1.46
SF3B3-209	ENST00000567635	SYT3	Q9BQG1	590 aa		5.95	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms