RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 KCNS3Q9BQ31 491 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 WACQ9BTA9 647 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 RACGAP1Q9H0H5 632 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 SEC61A2Q9H9S3 476 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 SIAEQ9HAT2 523 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 SLC25A19Q9HC21 320 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 CMC2Q9NRP2 79 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 RASSF1Q9NS23 344 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 FKBP7Q9Y680 259 aa10.64□□□□□ -0.71
SF3B3-208ENST00000567250 FAM221AA4D161 298 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 DEFB108AA8MXU0 73 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 ANKRD65E5RJM6 399 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 H0YHG0 523 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 M0R1B8 84 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 SLC16A7O60669 478 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 CTAG2O75638 210 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 BAG2O95816 211 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 IGKV3-15P01624 115 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 HMGN1P05114 100 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 CD79AP11912 226 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 CTLA4P16410 223 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 CDKN2AP42771 156 aaKnown RBP10.63□□□□□ -0.71
SF3B3-208ENST00000567250 DAPP51397 102 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF83P51522 516 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 CRISP1P54107 249 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 RAD23AP54725 363 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 PRSS12P56730 875 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 DAG1Q14118 895 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 NCMAPQ5T1S8 102 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 TMEM53Q6P2H8 277 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 SEZ6L2Q6UXD5 910 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 C22orf34Q6ZV56 151 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 GLB1L2Q8IW92 636 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF295-AS1Q8N0V1 137 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 DEPDC4Q8N2C3 294 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 OR2T4Q8NH00 348 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 OR4Q3Q8NH05 313 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 EME1Q96AY2 570 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 RADILQ96JH8 1075 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 HS3ST6Q96QI5 342 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 CIB1Q99828 191 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 NUAK2Q9H093 628 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 C1orf198Q9H425 327 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 RERGLQ9H628 205 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 CCNB1IP1Q9NPC3 277 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 RPRD1BQ9NQG5 326 aaKnown RBP10.63□□□□□ -0.71
SF3B3-208ENST00000567250 NPAP1Q9NZP6 1156 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 EDARQ9UNE0 448 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 RNF115Q9Y4L5 304 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 SETXQ7Z333 2677 aaKnown RBP10.63□□□□□ -0.71
SF3B3-208ENST00000567250 ALPK2Q86TB3 2170 aa10.63□□□□□ -0.71
SF3B3-208ENST00000567250 IGKV1D-43A0A0B4J1Z2 117 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 EI24O14681 340 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 CRYAAP02489 173 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 IGFBP1P08833 259 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-208ENST00000567250 CST2P09228 141 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 CBR1P16152 277 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 LAP3P28838 519 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 GIPRP48546 466 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 PTDSS1P48651 473 aaKnown RBP10.62□□□□□ -0.71
SF3B3-208ENST00000567250 CENPAP49450 140 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 ALDH3A2P51648 485 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 BLVRAP53004 296 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 PCBD1P61457 104 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 TUBA1BP68363 451 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 TUBA4AP68366 448 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 CDK5Q00535 292 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 PLP2Q04941 152 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 BSPH1Q075Z2 132 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 NPRL3Q12980 569 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 GINS1Q14691 196 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 RCN1Q15293 331 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 SGCAQ16586 387 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 FAM27BQ5VT28 67 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 TUBA1AQ71U36 451 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 ZNF771Q7L3S4 317 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-208ENST00000567250 ZBTB46Q86UZ6 589 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 SKA3Q8IX90 412 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 IQCF1Q8N6M8 205 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 SLC37A3Q8NCC5 494 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 PROKR2Q8NFJ6 384 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 IL17RDQ8NFM7 739 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 NABP1Q96AH0 204 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 RNF121Q9H920 327 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 C8orf4Q9NR00 106 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 POLE4Q9NR33 117 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 USE1Q9NZ43 259 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 CRNNQ9UBG3 495 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-208ENST00000567250 POLR1DQ9Y2S0 133 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 UGT2A1Q9Y4X1 527 aa10.62□□□□□ -0.71
SF3B3-208ENST00000567250 TACC2O95359 2948 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 APCP25054 2843 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 OR6C68A6NDL8 312 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 C12orf71A8MTZ7 269 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 ABCD4O14678 606 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 PTHP01270 115 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 IGLV1-44P01699 117 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 HLA-HP01893 362 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 ALPLP05186 524 aa10.61□□□□□ -0.71
SF3B3-208ENST00000567250 CD40P25942 277 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms