RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 DEFB113Q30KQ7 82 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 ALG10Q5BKT4 473 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 NCMAPQ5T1S8 102 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 TMEM236Q5W0B7 351 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 GPR139Q6DWJ6 353 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 ZNF704Q6ZNC4 412 aaPredicted RBP11.79□□□□□ -0.52
CLK3-218ENST00000566926 MEX3DQ86XN8 651 aaKnown RBP11.79□□□□□ -0.52
CLK3-218ENST00000566926 UEVLDQ8IX04 471 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 KDM8Q8N371 416 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 ANKK1Q8NFD2 765 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 TMEM163Q8TC26 289 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 MOGAT1Q96PD6 335 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 UBTD1Q9HAC8 227 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 CMC2Q9NRP2 79 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 BEX4Q9NWD9 120 aaPredicted RBP11.79□□□□□ -0.52
CLK3-218ENST00000566926 KLHL21Q9UJP4 597 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 AMDHD2Q9Y303 409 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 RNF115Q9Y4L5 304 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 NOX1Q9Y5S8 564 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 OTOGQ6ZRI0 2925 aa11.79□□□□□ -0.52
CLK3-218ENST00000566926 F8P00451 2351 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 A0A087WXM4 84 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 BLOC1S5-TXNDC5H3BN57 136 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 SLC1A7O00341 560 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 TMCC2O75069 709 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 WBP4O75554 376 aaKnown RBP11.78□□□□□ -0.52
CLK3-218ENST00000566926 WNT11O96014 354 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 ITGA5P08648 1049 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 IGFBP1P08833 259 aaPredicted RBP11.78□□□□□ -0.52
CLK3-218ENST00000566926 CD53P19397 219 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 SELENOPP49908 381 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 SH3BGRP55822 239 aaPredicted RBP11.78□□□□□ -0.52
CLK3-218ENST00000566926 FXYD6P3P58550 94 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 EFNB1P98172 346 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 PUDPQ08623 228 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 ZP4Q12836 540 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 TMED1Q13445 227 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 FAM205BPQ63HN1 556 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 ACSM5Q6NUN0 579 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 ADAM5Q6NVV9 412 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 KLHL24Q6TFL4 600 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 TMEM108Q6UXF1 575 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 HDDC2Q7Z4H3 204 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 PXKQ7Z7A4 578 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 GID4Q8IVV7 300 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 IQCF1Q8N6M8 205 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 TSPAN14Q8NG11 270 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 OR4Q3Q8NH05 313 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 CNIH3Q8TBE1 160 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 BOD1Q96IK1 185 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 RADILQ96JH8 1075 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 TMEM204Q9BSN7 226 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 MRPS26Q9BYN8 205 aaKnown RBP11.78□□□□□ -0.52
CLK3-218ENST00000566926 CXXC4Q9H2H0 198 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 VCX3AQ9NNX9 186 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 OBP2BQ9NPH6 170 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 NRIP3Q9NQ35 241 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 CNOT2Q9NZN8 540 aaKnown RBP11.78□□□□□ -0.52
CLK3-218ENST00000566926 B3GAT1Q9P2W7 334 aa11.78□□□□□ -0.52
CLK3-218ENST00000566926 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.78□□□□□ -0.52
CLK3-218ENST00000566926 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
CLK3-218ENST00000566926 EFCAB10A6NFE3 127 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 ZNF726A6NNF4 738 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 MS4A18H0YCH9 400 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 HS3ST1O14792 307 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 PRODHO43272 600 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 TLX2O43763 284 aaPredicted RBP11.77□□□□□ -0.53
CLK3-218ENST00000566926 TXNDC12O95881 172 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 ADORA3P0DMS8 318 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 PIPP12273 146 aaPredicted RBP11.77□□□□□ -0.53
CLK3-218ENST00000566926 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
CLK3-218ENST00000566926 AHCYP23526 432 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 SDHAP31040 664 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 DAP3P51398 398 aaKnown RBP11.77□□□□□ -0.53
CLK3-218ENST00000566926 LTBQ06643 244 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 RPL18Q07020 188 aaKnown RBP11.77□□□□□ -0.53
CLK3-218ENST00000566926 MS4A18Q3C1V0 323 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 ARMC4Q5T2S8 1044 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 C9orf135Q5VTT2 229 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 NXNL2Q5VZ03 156 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 THSD4Q6ZMP0 1018 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 ADCK1Q86TW2 530 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 LSRQ86X29 649 aaPredicted RBP11.77□□□□□ -0.53
CLK3-218ENST00000566926 GPR137CQ8N3F9 429 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 LRRC17Q8N6Y2 441 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 ZNF611Q8N823 705 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 TCEANCQ8N8B7 351 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 OR52N5Q8NH56 324 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 MYDGFQ969H8 173 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 LRR1Q96L50 414 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 CCL19Q99731 98 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 MOV10Q9HCE1 1003 aaKnown RBP11.77□□□□□ -0.53
CLK3-218ENST00000566926 B3GAT2Q9NPZ5 323 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 BATF3Q9NR55 127 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 SLC17A5Q9NRA2 495 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 SEC14L4Q9UDX3 406 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 PCDHGB5Q9Y5G0 923 aa11.77□□□□□ -0.53
CLK3-218ENST00000566926 SLC25A15Q9Y619 301 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms