RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 HIST3H3Q16695 136 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 UNQ6126/PRO20091Q6UXV3 157 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 DEF8Q6ZN54 512 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 HDXQ7Z353 690 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 TSPYL5Q86VY4 417 aaPredicted RBP10.21□□□□□ -0.77
UBR1-206ENST00000566493 TEX29Q8N6K0 151 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 PFN4Q8NHR9 129 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 TMEM239Q8WW34 195 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 LRRC37BQ96QE4 947 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 MRPL13Q9BYD1 178 aaKnown RBP10.21□□□□□ -0.77
UBR1-206ENST00000566493 RACGAP1Q9H0H5 632 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 SIAEQ9HAT2 523 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 MEPEQ9NQ76 525 aaPredicted RBP10.21□□□□□ -0.77
UBR1-206ENST00000566493 MRGBPQ9NV56 204 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 EIF3KQ9UBQ5 218 aaKnown RBP10.21□□□□□ -0.77
UBR1-206ENST00000566493 RIMS3Q9UJD0 308 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 MED31Q9Y3C7 131 aa10.21□□□□□ -0.77
UBR1-206ENST00000566493 IGLV3-9A0A075B6K5 115 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 A0A0A6YYJ9 748 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 TRAV20A0A0B4J274 112 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 GMNCA6NCL1 334 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 WNT9BO14905 357 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 EDF1O60869 148 aaKnown RBP10.2□□□□□ -0.78
UBR1-206ENST00000566493 NCR1O76036 304 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 AVPP01185 164 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 IGF2P01344 180 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 THRBP10828 461 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 IFNA8P32881 189 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 CRYBB2P43320 205 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 GZMMP51124 257 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 MVKQ03426 396 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 RUNX1T1Q06455 604 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 PIN1Q13526 163 aaPredicted RBP10.2□□□□□ -0.78
UBR1-206ENST00000566493 SGCAQ16586 387 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 PABPC1L2AQ5JQF8 200 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 C10orf128Q5T292 105 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 FAHD2BQ6P2I3 314 aaPredicted RBP10.2□□□□□ -0.78
UBR1-206ENST00000566493 ERICH5Q6P6B1 374 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 NKAIN4Q8IVV8 208 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 OR8J3Q8NGG0 315 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 OR1J1Q8NGS3 322 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 TMEM255BQ8WV15 326 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 LRRC58Q96CX6 371 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 FAHD2AQ96GK7 314 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 TSPAN32Q96QS1 320 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 NKIRAS2Q9NYR9 191 aa10.2□□□□□ -0.78
UBR1-206ENST00000566493 IGHV1-69-2A0A0G2JMI3 117 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 PLSCR5A0PG75 271 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 FBP2O00757 339 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 SHOX2O60902 331 aaPredicted RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 RP2O75695 350 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 SLC2A10O95528 541 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 NPPAP01160 153 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 MMP7P09237 267 aaPredicted RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 TNFRSF1BP20333 461 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 STOMP27105 288 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 GCH1P30793 250 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 GUCA1AP43080 201 aaPredicted RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 OR1E2P47887 323 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 GDI2P50395 445 aaKnown RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 ZNF133P52736 654 aaPredicted RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 CRYBA2P53672 197 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 ERVS71-1P61550 626 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 LMO4P61968 165 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 MRPS34P82930 218 aaKnown RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 GLO1Q04760 184 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 CD47Q08722 323 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 MAPRE2Q15555 327 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 TSTQ16762 297 aaKnown RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 HFEQ30201 348 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 ZNF718Q3SXZ3 478 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 RABL3Q5HYI8 236 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 AVPI1Q5T686 147 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 ACSM5Q6NUN0 579 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 CALHM3Q86XJ0 350 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 MOSPD2Q8NHP6 518 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 ZNF418Q8TF45 676 aaPredicted RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 LIPHQ8WWY8 451 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 NSMAFQ92636 917 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 RAB39BQ96DA2 213 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 TIMD4Q96H15 378 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 RBP7Q96R05 134 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 SEPHS2Q99611 448 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 TMEM120AQ9BXJ8 343 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 SMURF2Q9HAU4 748 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 C20orf141Q9NUB4 165 aa10.19□□□□□ -0.78
UBR1-206ENST00000566493 ARGLU1Q9NWB6 273 aaPredicted RBP10.19□□□□□ -0.78
UBR1-206ENST00000566493 C5orf49A4QMS7 147 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 HTR3EA5X5Y0 456 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 NPIPB13A6NJU9 1138 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 BBIP1A8MTZ0 92 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 CLDN25C9JDP6 229 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 NPIPB4C9JG80 1138 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 MRASO14807 208 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 PNPP00491 289 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 IGHV3-13P01766 116 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 TROVE2P10155 538 aaKnown RBP eCLIP10.18□□□□□ -0.78
UBR1-206ENST00000566493 ZNF32P17041 273 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 CDAP32320 146 aa10.18□□□□□ -0.78
UBR1-206ENST00000566493 ZNF81P51508 661 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms