RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RACGAP1Q9H0H5 632 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 SIAEQ9HAT2 523 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 ZNF275Q9NSD4 429 aaPredicted RBP15.67■□□□□ 0.1
USB1-213ENST00000566292 ZNF446Q9NWS9 450 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 STX18Q9P2W9 335 aaKnown RBP15.67■□□□□ 0.1
USB1-213ENST00000566292 HIF3AQ9Y2N7 669 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 SNX13Q9Y5W8 968 aa15.67■□□□□ 0.1
USB1-213ENST00000566292 IQCMA0A1B0GVH7 501 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 RP2O75695 350 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 LCKP06239 509 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 IFI30P13284 250 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 YAP1P46937 504 aaKnown RBP15.66■□□□□ 0.1
USB1-213ENST00000566292 KLF3P57682 345 aaPredicted RBP15.66■□□□□ 0.1
USB1-213ENST00000566292 HSF2Q03933 536 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 PLP2Q04941 152 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 CD47Q08722 323 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 TOP3AQ13472 1001 aaPredicted RBP15.66■□□□□ 0.1
USB1-213ENST00000566292 NKPD1Q17RQ9 610 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 ALG10Q5BKT4 473 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 PABPC1L2AQ5JQF8 200 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 SLC25A47Q6Q0C1 308 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 VTCN1Q7Z7D3 282 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 MEX3DQ86XN8 651 aaKnown RBP15.66■□□□□ 0.1
USB1-213ENST00000566292 SLC15A3Q8IY34 581 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 CLDN22Q8N7P3 220 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 LRRC75AQ8NAA5 344 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 CLDND2Q8NHS1 167 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 ZNF519Q8TB69 540 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 NSMAFQ92636 917 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 BPIFA2Q96DR5 249 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 BCL2L14Q9BZR8 327 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 NARFLQ9H6Q4 476 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 SMURF2Q9HAU4 748 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 MAN2C1Q9NTJ4 1040 aa15.66■□□□□ 0.1
USB1-213ENST00000566292 TMEFF2Q9UIK5 374 aaPredicted RBP15.66■□□□□ 0.1
USB1-213ENST00000566292 ANK2Q01484 3957 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 C17orf100A8MU93 164 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 J3KTA2 159 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 SLC22A2O15244 555 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 ZNF32P17041 273 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 MAKP20794 623 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 APLNRP35414 380 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 RAD52P43351 418 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 MRPS11P82912 194 aaKnown RBP15.65■□□□□ 0.1
USB1-213ENST00000566292 FHL1Q13642 323 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 SGCAQ16586 387 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 IGFN1Q86VF2 1251 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 C11orf40Q8WZ69 217 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 GTF3AQ92664 365 aaKnown RBP15.65■□□□□ 0.1
USB1-213ENST00000566292 LRMDAQ9H2I8 198 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 CCDC134Q9H6E4 229 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 HINT3Q9NQE9 182 aaKnown RBP15.65■□□□□ 0.1
USB1-213ENST00000566292 RHCGQ9UBD6 479 aa15.65■□□□□ 0.1
USB1-213ENST00000566292 FAM157AC9JC47 383 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 FFAR1O14842 300 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 IGHMP01871 453 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 SAGP10523 405 aaPredicted RBP15.64■□□□□ 0.09
USB1-213ENST00000566292 STOMP27105 288 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 WNT5AP41221 380 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 DVL1P1P54792 670 aaPredicted RBP15.64■□□□□ 0.09
USB1-213ENST00000566292 TMEM33P57088 247 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 SELENOVP59797 346 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 RPL27P61353 136 aaKnown RBP15.64■□□□□ 0.09
USB1-213ENST00000566292 TAF11Q15544 211 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 UGT2A3Q6UWM9 527 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 NRMQ8IXM6 262 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 OFCC1Q8IZS5 231 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 ICA1LQ8NDH6 482 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 OR1J1Q8NGS3 322 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 RP9Q8TA86 221 aaKnown RBP15.64■□□□□ 0.09
USB1-213ENST00000566292 POM121L2Q96KW2 1035 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 ALG12Q9BV10 488 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 C19orf24Q9BVV8 132 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 KCNN2Q9H2S1 579 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 CCNB1IP1Q9NPC3 277 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 SLCO1C1Q9NYB5 712 aa15.64■□□□□ 0.09
USB1-213ENST00000566292 LOC100509620A0A075B734 347 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 TRAV27A0A087WT01 109 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 HTR3EA5X5Y0 456 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 B4DSR2 109 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 PPIHO43447 177 aaKnown RBP15.63■□□□□ 0.09
USB1-213ENST00000566292 COX4I1P13073 169 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 CCNOP22674 350 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 CTXN1P60606 82 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 ERVK-25P63136 954 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 CCL8P80075 99 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 PSG4Q00888 419 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 LIPEQ05469 1076 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 PRKCDQ05655 676 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 TMEM255AQ5JRV8 349 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 FAM27BQ5VT28 67 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 TMEM154Q6P9G4 183 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 ZNF101Q8IZC7 436 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 AKR7LQ8NHP1 331 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 SNX33Q8WV41 574 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 LZICQ8WZA0 190 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 FNDC11Q9BVV2 318 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 ZNF416Q9BWM5 594 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 TREM2Q9NZC2 230 aa15.63■□□□□ 0.09
USB1-213ENST00000566292 GPR160Q9UJ42 338 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms