RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CBLP22681 906 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 CSNK1A1P48729 337 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 DNAL1Q4LDG9 190 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 MIDNQ504T8 468 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 LRFN4Q6PJG9 635 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 LINC00114Q6XXX2 140 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 RBM15BQ8NDT2 890 aaKnown RBP10.81□□□□□ -0.68
RNF40-208ENST00000565995 OR6X1Q8NH79 312 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 BBS10Q8TAM1 723 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 ELMOD3Q96FG2 381 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 MOGAT1Q96PD6 335 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 EPYCQ99645 322 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 CGREF1Q99674 301 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 TMEM43Q9BTV4 400 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 ASPNQ9BXN1 380 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 PAIP1Q9H074 479 aaKnown RBP10.81□□□□□ -0.68
RNF40-208ENST00000565995 SAP30LQ9HAJ7 183 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 CACYBPQ9HB71 228 aaKnown RBP10.81□□□□□ -0.68
RNF40-208ENST00000565995 TMEM38BQ9NVV0 291 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 GLTPQ9NZD2 209 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 SLAMF8Q9P0V8 285 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 MMP24Q9Y5R2 645 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 CACNG2Q9Y698 323 aa10.81□□□□□ -0.68
RNF40-208ENST00000565995 A0A0B4J2E0 115 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 A0A1B0GX12 115 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 FOXH1O75593 365 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 MT-ND5P03915 603 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 LCKP06239 509 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 ZFP36P26651 326 aaKnown RBP10.8□□□□□ -0.68
RNF40-208ENST00000565995 GCH1P30793 250 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 MMP15P51511 669 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 MTPNP58546 118 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 PSME3P61289 254 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 ERVS71-1P61550 626 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 SLC3A1Q07837 685 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 RBBP4Q09028 425 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 FADDQ13158 208 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 PMS2P3Q13401 168 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 RGNQ15493 299 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 KLF17Q5JT82 389 aaPredicted RBP10.8□□□□□ -0.68
RNF40-208ENST00000565995 LRIF1Q5T3J3 769 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 TMEM53Q6P2H8 277 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 DHRS4L2Q6PKH6 230 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 HACD2Q6Y1H2 254 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 ARPINQ7Z6K5 226 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 COMTD1Q86VU5 262 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 DEFB107AQ8IZN7 70 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 OR1J2Q8NGS2 313 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 MCUR1Q96AQ8 359 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 ZNF48Q96MX3 618 aaPredicted RBP10.8□□□□□ -0.68
RNF40-208ENST00000565995 C1QTNF5Q9BXJ0 243 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 ADA2Q9NZK5 511 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 VAPAQ9P0L0 249 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 ZNF69Q9UC07 566 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 KLHL21Q9UJP4 597 aa10.8□□□□□ -0.68
RNF40-208ENST00000565995 EVPLLA8MZ36 301 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 FXYD1O00168 92 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 MT-ATP6P00846 226 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 NPPAP01160 153 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 IGHV1-46P01743 117 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 NUDT7P0C024 238 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 ZNF12P17014 697 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 HOXB9P17482 250 aaPredicted RBP10.79□□□□□ -0.68
RNF40-208ENST00000565995 PPIBP23284 216 aaKnown RBP10.79□□□□□ -0.68
RNF40-208ENST00000565995 SLC7A2P52569 658 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 BIDP55957 195 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 NCALDP61601 193 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 LCN2P80188 198 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 HIST3H3Q16695 136 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 TSTQ16762 297 aaKnown RBP10.79□□□□□ -0.68
RNF40-208ENST00000565995 TBC1D28Q2M2D7 210 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
RNF40-208ENST00000565995 DLEU7Q6UYE1 221 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 C9orf139Q6ZV77 190 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 C1orf174Q8IYL3 243 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 PGAM4Q8N0Y7 254 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 OR5J2Q8NH18 312 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 SLC25A28Q96A46 364 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 SLC25A44Q96H78 314 aaPredicted RBP10.79□□□□□ -0.68
RNF40-208ENST00000565995 SH3GL1Q99961 368 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 SH3GL3Q99963 347 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 GAL3ST1Q99999 423 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 HOPXQ9BPY8 73 aaPredicted RBP10.79□□□□□ -0.68
RNF40-208ENST00000565995 RAD21L1Q9H4I0 556 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 EVA1AQ9H8M9 152 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 CDH20Q9HBT6 801 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 SPAG4Q9NPE6 437 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 SLC25A37Q9NYZ2 338 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 TESQ9UGI8 421 aaKnown RBP10.79□□□□□ -0.68
RNF40-208ENST00000565995 PURGQ9UJV8 347 aaKnown RBP10.79□□□□□ -0.68
RNF40-208ENST00000565995 CORO2BQ9UQ03 480 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 GMEB1Q9Y692 573 aa10.79□□□□□ -0.68
RNF40-208ENST00000565995 A8MXK9 166 aa10.78□□□□□ -0.68
RNF40-208ENST00000565995 TRAPPC2LH3BP13 241 aa10.78□□□□□ -0.68
RNF40-208ENST00000565995 CLIC1O00299 241 aa10.78□□□□□ -0.68
RNF40-208ENST00000565995 DHHO43323 396 aa10.78□□□□□ -0.68
RNF40-208ENST00000565995 TPST2O60704 377 aa10.78□□□□□ -0.68
RNF40-208ENST00000565995 FARS2O95363 451 aaKnown RBP10.78□□□□□ -0.68
RNF40-208ENST00000565995 CD55P08174 381 aa10.78□□□□□ -0.68
RNF40-208ENST00000565995 MMP7P09237 267 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms