RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 WARS2Q9UGM6 360 aaKnown RBP6.86□□□□□ -1.31
CDH1-208ENST00000565810 POLR1DQ9Y2S0 133 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 RPL36Q9Y3U8 105 aaKnown RBP6.86□□□□□ -1.31
CDH1-208ENST00000565810 LRRC42Q9Y546 428 aa6.86□□□□□ -1.31
CDH1-208ENST00000565810 RELNP78509 3460 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 IGLV1-36A0A0B4J1U3 117 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 IGKV1D-43A0A0B4J1Z2 117 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 IRGMA1A4Y4 181 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 J3QKU1 62 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 LYZL6O75951 148 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 AGFG2O95081 481 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 OR8G3PP0DMU2 310 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 CLUP10909 449 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 HOXB1P14653 301 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 GABRB1P18505 474 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 MSR1P21757 451 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 IGHV1-2P23083 117 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 CD79BP40259 229 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 CAPZA2P47755 286 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 MTNR1AP48039 350 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 CXCR4P61073 352 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 UBE2NP61088 152 aaKnown RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 LSM6P62312 80 aaKnown RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 MRPS34P82930 218 aaKnown RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 ARF1P84077 181 aaKnown RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 POU4F2Q12837 409 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 NRN1LQ496H8 165 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 KLHL22Q53GT1 634 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 C6orf141Q5SZD1 244 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 SFRP5Q5T4F7 317 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 ANKRD16Q6P6B7 361 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 ZNF474Q6S9Z5 364 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 KLHL24Q6TFL4 600 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 LINGO2Q7L985 606 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 BHLHA15Q7RTS1 189 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 BCDIN3DQ7Z5W3 292 aaKnown RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 DPPA2Q7Z7J5 298 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 CXorf67Q86X51 503 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 CCDC36Q8IYA8 594 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 GABRG1Q8N1C3 465 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 ZNF433Q8N7K0 673 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 RELL2Q8NC24 303 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 C1orf162Q8NEQ5 155 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 BBS1Q8NFJ9 593 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 BPIFB6Q8NFQ5 453 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 STEAP2Q8NFT2 490 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 CNIH3Q8TBE1 160 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 NANOS1Q8WY41 292 aaKnown RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 C11orf40Q8WZ69 217 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 ZMYND19Q96E35 227 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 MYCBPQ99417 103 aaPredicted RBP6.85□□□□□ -1.31
CDH1-208ENST00000565810 WACQ9BTA9 647 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 HCAR1Q9BXC0 346 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 NELFAQ9H3P2 528 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 POLE4Q9NR33 117 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 TMEM38BQ9NVV0 291 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 HAO2Q9NYQ3 351 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 JKAMPQ9P055 326 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 AASSQ9UDR5 926 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 BLOC1S6Q9UL45 172 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 PCDHGB1Q9Y5G3 927 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 POLEQ07864 2286 aa6.85□□□□□ -1.31
CDH1-208ENST00000565810 IGSF10Q6WRI0 2623 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 RP1L1Q8IWN7 2480 aaPredicted RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 A0A096LPE4 126 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 A0A1W2PPZ6 126 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 TVP23AA6NH52 213 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 C12orf71A8MTZ7 269 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 C16orf97H3BN30 126 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 DCTN6O00399 190 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 ZNF593O00488 134 aaPredicted RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 ZG16O60844 167 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 FAM20BO75063 409 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 WBP4O75554 376 aaKnown RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 RAD51DO75771 328 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 CLDN14O95500 239 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 HRGP04196 525 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 ITGA5P08648 1049 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 B4GALT1P15291 398 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 PSMB1P20618 241 aaKnown RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 COX5AP20674 150 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 SLC2A5P22732 501 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 PAX7P23759 505 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 CDAP32320 146 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 ENTPD1P49961 510 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 PCBD1P61457 104 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 ADAM8P78325 824 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 FAM27E3Q08E93 113 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 FBXL19-AS1Q494R0 122 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 SLC36A2Q495M3 483 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 LINC01590Q5TEZ4 76 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 FAM27BQ5VT28 67 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 FOXL2NBQ6ZUU3 175 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 ZNF627Q7L945 461 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 SHFQ7M4L6 423 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 SSX8Q7RTT4 187 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 SLC16A14Q7RTX9 510 aa6.84□□□□□ -1.31
CDH1-208ENST00000565810 ERI1Q8IV48 349 aaKnown RBP6.84□□□□□ -1.31
CDH1-208ENST00000565810 ZNF786Q8N393 782 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms