RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PCNX1Q96RV3 2341 aa9.81□□□□□ -0.84
SF3B3-205ENST00000564899 MAP1AP78559 2803 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 A0A087WXM4 84 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 IGLV1-36A0A0B4J1U3 117 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 IGKV1D-43A0A0B4J1Z2 117 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 CD8B2A6NJW9 211 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 PRRG2O14669 202 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 SS18L1O75177 396 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 MT-ND2P03891 347 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 CDK1P06493 297 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 STSP08842 583 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 MRPL3P09001 348 aaKnown RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 SMIM18P0DKX4 95 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 AGTR1P30556 359 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 ST3GAL4Q11206 333 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 POU4F2Q12837 409 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 GGTLC2Q14390 218 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 ETFDHQ16134 617 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 HIST3H3Q16695 136 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 KLHL22Q53GT1 634 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 LINC01590Q5TEZ4 76 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 ZNF773Q6PK81 442 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 SHFQ7M4L6 423 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 C9orf106Q8NAJ2 232 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 OR52I1Q8NGK6 324 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 NSMAFQ92636 917 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 MCHR2Q969V1 340 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 INTS12Q96CB8 462 aaKnown RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 TMEM80Q96HE8 168 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 GMPPAQ96IJ6 420 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 CNN2Q99439 309 aaKnown RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 TM9SF2Q99805 663 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 ULBP2Q9BZM5 246 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 ADGRL4Q9HBW9 690 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 HAO2Q9NYQ3 351 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 SCOCQ9UIL1 159 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 FOXD3Q9UJU5 478 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 OSGIN2Q9Y236 505 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 COA3Q9Y2R0 106 aaPredicted RBP9.8□□□□□ -0.84
SF3B3-205ENST00000564899 SNX5Q9Y5X3 404 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 MYO7BQ6PIF6 2116 aa9.8□□□□□ -0.84
SF3B3-205ENST00000564899 MBD3L4A6NDZ8 208 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 MBD3L3A6NE82 208 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 TVP23AA6NH52 213 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 MBD3L5A6NJ08 208 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 PRSS44E7EML9 344 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 SLC19A2O60779 497 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 MRPS14O60783 128 aaKnown RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 UPK3AO75631 287 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 RAB36O95755 333 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 FADS2O95864 444 aaKnown RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 HLA-DQA2P01906 255 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 HTR1AP08908 422 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 HOXD4P09016 255 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 QDPRP09417 244 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 SBK2P0C263 348 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 ATP6V1B1P15313 513 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 NTF4P34130 210 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 NAA10P41227 235 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 BLVRAP53004 296 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 SIRPAP78324 504 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 GLO1Q04760 184 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 PHYHD1Q5SRE7 291 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 OR2A2Q6IF42 318 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 TMEM154Q6P9G4 183 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 SLC25A47Q6Q0C1 308 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 LYPD4Q6UWN0 246 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 B3GNT6Q6ZMB0 384 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 PRSS48Q7RTY5 328 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 NUFIP2Q7Z417 695 aaKnown RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 ZNF100Q8IYN0 542 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 GCNT2Q8N0V5 402 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 GPR137CQ8N3F9 429 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 POMGNT2Q8NAT1 580 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 ZNF511Q8NB15 262 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 OR4F15Q8NGB8 312 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 MBD3L2Q8NHZ7 208 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 APH1AQ96BI3 265 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 FOXN4Q96NZ1 517 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 ALKBH3Q96Q83 286 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 MRPS26Q9BYN8 205 aaKnown RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 SLCO5A1Q9H2Y9 848 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 TP63Q9H3D4 680 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 FGF20Q9NP95 211 aaPredicted RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 B3GAT2Q9NPZ5 323 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 ITGB1BP2Q9UKP3 347 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 DIMT1Q9UNQ2 313 aaKnown RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 EXOGQ9Y2C4 368 aaKnown RBP9.79□□□□□ -0.84
SF3B3-205ENST00000564899 EMC9Q9Y3B6 208 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 FAM215AQ9Y5M1 114 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 COMMD3-BMI1R4GMX3 469 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 KIAA1549Q9HCM3 1950 aa9.79□□□□□ -0.84
SF3B3-205ENST00000564899 ANKHD1Q8IWZ3 2542 aaKnown RBP9.78□□□□□ -0.84
SF3B3-205ENST00000564899 FBN3Q75N90 2809 aa9.78□□□□□ -0.84
SF3B3-205ENST00000564899 A0A1W2PPL8 197 aa9.78□□□□□ -0.84
SF3B3-205ENST00000564899 OR6C65A6NJZ3 312 aa9.78□□□□□ -0.84
SF3B3-205ENST00000564899 DHHO43323 396 aa9.78□□□□□ -0.84
SF3B3-205ENST00000564899 SELENOFO60613 162 aa9.78□□□□□ -0.84
SF3B3-205ENST00000564899 KRT33AO76009 404 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms