RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 FREM3P0C091 2139 aa13.87□□□□□ -0.19
COMMD4-210ENST00000564587 ATRXP46100 2492 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 TRBV2A0A0J9YWF9 115 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF814B7Z6K7 855 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF254O75437 659 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 CEACAM4O75871 244 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 GATBO75879 557 aaKnown RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF432O94892 652 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 EDNRAP25101 427 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 LAP3P28838 519 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 S100A5P33763 92 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 TGFBR1P36897 503 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 GUCA1AP43080 201 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 GDI2P50395 445 aaKnown RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 TNFSF10P50591 281 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 CLDN17P56750 224 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 PPIAP62937 165 aaKnown RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 ROM1Q03395 351 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 DBPQ10586 325 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 DCTN2Q13561 401 aaKnown RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 SLC17A1Q14916 467 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 SLC10A1Q14973 349 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 HIST3H3Q16695 136 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF829Q3KNS6 432 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 SLC25A47Q6Q0C1 308 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 DEGS2Q6QHC5 323 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 LYPD4Q6UWN0 246 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 CROCCP3Q8IVE0 287 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF679Q8IYX0 411 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 RPS4Y2Q8TD47 263 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 THRSPQ92748 146 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 OR8B4Q96RC9 309 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 EMC6Q9BV81 110 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 MROQ9BYG7 248 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 RNF167Q9H6Y7 350 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 MRPL22Q9NWU5 206 aaKnown RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 IKZF2Q9UKS7 526 aa13.86□□□□□ -0.19
COMMD4-210ENST00000564587 SIRT4Q9Y6E7 314 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-210ENST00000564587 TRAV17A0A0B4J275 112 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CLDN25C9JDP6 229 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 E9PI62 339 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CDRT1O95170 752 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 SPARCP09486 303 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CFL1P23528 166 aaKnown RBP13.85□□□□□ -0.19
COMMD4-210ENST00000564587 RPS19P39019 145 aaKnown RBP13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CSNK1A1P48729 337 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 MTNR1BP49286 362 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF133P52736 654 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-210ENST00000564587 SUCLG1P53597 346 aaKnown RBP13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CLDN20P56880 219 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 SLC3A1Q07837 685 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CAMK2DQ13557 499 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 ZNF846Q147U1 533 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 KCNMB1Q16558 191 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 FDX2Q6P4F2 183 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 TPRA1Q86W33 373 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 RFLNBQ8N5W9 214 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 OR10D3Q8NH80 312 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 NEIL3Q8TAT5 605 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 ABHD4Q8TB40 342 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 AP3S1Q92572 193 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 GHSRQ92847 366 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 BORCS5Q969J3 196 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 TMEM54Q969K7 222 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 SLC25A46Q96AG3 418 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 TRMT61AQ96FX7 289 aaKnown RBP13.85□□□□□ -0.19
COMMD4-210ENST00000564587 PGLYRP3Q96LB9 341 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CDADC1Q9BWV3 514 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 HDHD5Q9BXW7 423 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 HES7Q9BYE0 225 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 ACOXLQ9NUZ1 547 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 GLTPQ9NZD2 209 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 MRM2Q9UI43 246 aaKnown RBP13.85□□□□□ -0.19
COMMD4-210ENST00000564587 KIAA1549Q9HCM3 1950 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CNTRLQ7Z7A1 2325 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 SPTBN2O15020 2390 aa13.85□□□□□ -0.19
COMMD4-210ENST00000564587 CEP250Q9BV73 2442 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 ALPK2Q86TB3 2170 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 SMAD9O15198 467 aaKnown RBP13.84□□□□□ -0.19
COMMD4-210ENST00000564587 CXCL13O43927 109 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 RAMP1O60894 148 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 ARL6IP5O75915 188 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 SYNGR4O95473 234 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 ABHD16AO95870 558 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 INHBBP09529 407 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 WT1P19544 449 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-210ENST00000564587 MAGEA5P43359 124 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 EIF1AXP47813 144 aaKnown RBP13.84□□□□□ -0.19
COMMD4-210ENST00000564587 FMODQ06828 376 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 RASGEF1BQ0VAM2 473 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 ALKBH1Q13686 389 aaKnown RBP13.84□□□□□ -0.19
COMMD4-210ENST00000564587 EIF2B1Q14232 305 aaKnown RBP13.84□□□□□ -0.19
COMMD4-210ENST00000564587 ETFDHQ16134 617 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 DEFB109BQ30KR1 87 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 YIF1BQ5BJH7 314 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 C10orf128Q5T292 105 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 LIPNQ5VXI9 398 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 ABLIM2Q6H8Q1 611 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 TMEM91Q6ZNR0 172 aa13.84□□□□□ -0.19
COMMD4-210ENST00000564587 RHOUQ7L0Q8 258 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms