RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 PARP11Q9NR21 331 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 SIRT7Q9NRC8 400 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 MARCH5Q9NX47 278 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 NKIRAS2Q9NYR9 191 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 RCC2Q9P258 522 aaKnown RBP5.05□□□□□ -1.6
CHD9-210ENST00000564582 CRLS1Q9UJA2 301 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 RCE1Q9Y256 329 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 MEMO1Q9Y316 297 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 TIMM10BQ9Y5J6 103 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 TRPV2Q9Y5S1 764 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 MTCH2Q9Y6C9 303 aa5.05□□□□□ -1.6
CHD9-210ENST00000564582 NUP205Q92621 2012 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TBC1D3DA0A087WVF3 549 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TBC1D3IA0A087WXS9 549 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TBC1D3EA0A087X179 549 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TBC1D3KA0A087X1G2 549 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TRBV6-7A0A0A0MS04 114 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 A0A0B4J2A0 478 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 A0A1B0GW64 132 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TBC1D3FA6NER0 549 aaPredicted RBP5.04□□□□□ -1.6
CHD9-210ENST00000564582 CD8B2A6NJW9 211 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 DUXAA6NLW8 204 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 B4DEV8 164 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TBC1D3LB9A6J9 549 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 SURF4O15260 269 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 XRCC3O43542 346 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 NUDT21O43809 227 aaKnown RBP5.04□□□□□ -1.6
CHD9-210ENST00000564582 LANCL1O43813 399 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 LRATO95237 230 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 PRAMEF12O95522 483 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 WNT1P04628 370 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 LGALS2P05162 132 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 GLAP06280 429 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 OR2T7P0C7T2 308 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 METTL15P1P0C7V9 234 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 RNH1P13489 461 aaKnown RBP5.04□□□□□ -1.6
CHD9-210ENST00000564582 ACP5P13686 325 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 RAB5AP20339 215 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 NT5EP21589 574 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 DRD5P21918 477 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TNFSF4P23510 183 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 MMP11P24347 488 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 ITGA3P26006 1051 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 CRABP1P29762 137 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 AQP1P29972 269 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 ACTR1BP42025 376 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TM4SF4P48230 202 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 SRP9P49458 86 aaKnown RBP5.04□□□□□ -1.6
CHD9-210ENST00000564582 KHKP50053 298 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 CCR4P51679 360 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 CTSCP53634 463 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 MAXP61244 160 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 ST8SIA6P61647 398 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 HBA1P69905 142 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 COTL1Q14019 142 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 GANABQ14697 944 aaKnown RBP5.04□□□□□ -1.6
CHD9-210ENST00000564582 PGGHGQ32M88 737 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 EIPR1Q53HC9 387 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 FAM46CQ5VWP2 391 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 FAM71E1Q6IPT2 247 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TBC1D3CQ6IPX1 549 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 HEPHL1Q6MZM0 1159 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 JMJD6Q6NYC1 403 aaPredicted RBP5.04□□□□□ -1.6
CHD9-210ENST00000564582 FAM180BQ6P0A1 224 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 PODNL1Q6PEZ8 512 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 CLEC9AQ6UXN8 241 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 UNQ9370/PRO34162Q6UXP9 181 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TMEM64Q6YI46 380 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 MBOAT1Q6ZNC8 495 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 Q6ZTK2 550 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 SMIM5Q71RC9 77 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 BHLHA9Q7RTU4 235 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 C6orf120Q7Z4R8 191 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 C9orf40Q8IXQ3 194 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 TBC1D3Q8IZP1 549 aaPredicted RBP5.04□□□□□ -1.6
CHD9-210ENST00000564582 C10orf111Q8N326 155 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 C11orf44Q8N8P7 122 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 ZDHHC22Q8N966 263 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 HSD17B11Q8NBQ5 300 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 OR2T27Q8NH04 317 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 AKR7LQ8NHP1 331 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 M1APQ8TC57 530 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 NTN5Q8WTR8 489 aaPredicted RBP5.04□□□□□ -1.6
CHD9-210ENST00000564582 ABHD5Q8WTS1 349 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 THAP4Q8WY91 577 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 SMARCD2Q92925 531 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 ESAMQ96AP7 390 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 VOPP1Q96AW1 172 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 SMIM19Q96E16 107 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 BTF3L4Q96K17 158 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 SMIM8Q96KF7 97 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 MS4A4EQ96PG1 132 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 LYSMD1Q96S90 227 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 STACQ99469 402 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 PKP4Q99569 1192 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 PHB2Q99623 299 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 MACROD1Q9BQ69 325 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 NRIP2Q9BQI9 281 aa5.04□□□□□ -1.6
CHD9-210ENST00000564582 GPR61Q9BZJ8 451 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms