RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 CNIH2Q6PI25 160 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 CMC1Q7Z7K0 106 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 IQCF2Q8IXL9 164 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 TMEM61Q8N0U2 210 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 OR5K2Q8NHB8 316 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 NDRG1Q92597 394 aaKnown RBP1.81□□□□□ -2.12
CHD9-209ENST00000564255 ASB9Q96DX5 294 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 MED8Q96G25 268 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 TMEM101Q96IK0 257 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 SLC7A5P2Q9GIP4 190 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 SAMSN1Q9NSI8 373 aaKnown RBP1.81□□□□□ -2.12
CHD9-209ENST00000564255 GOLT1BQ9Y3E0 138 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 SAR1BQ9Y6B6 198 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 A0A0B4J2A0 478 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ZNF816-ZNF321PA0A0X1KG74 233 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 H0YHG0 523 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ZBTB5O15062 677 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 LRP5O75197 1615 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 FCN3O75636 299 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 OXTP01178 125 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 TACSTD2P09758 323 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 CSF3P09919 207 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 HTR1EP28566 365 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 GPX4P36969 197 aaPredicted RBP1.81□□□□□ -2.12
CHD9-209ENST00000564255 SLC1A2P43004 574 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ACTA2P62736 377 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ACTG2P63267 376 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ACTC1P68032 377 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ACTA1P68133 377 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ECH1Q13011 328 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 LTBP1Q14766 1721 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 IL17AQ16552 155 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ZNF239Q16600 458 aaKnown RBP1.81□□□□□ -2.12
CHD9-209ENST00000564255 FHL5Q5TD97 284 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 MRPL21Q7Z2W9 205 aaKnown RBP1.81□□□□□ -2.12
CHD9-209ENST00000564255 FAM122BQ7Z309 247 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 DENND4AQ7Z401 1863 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 C11orf42Q8N5U0 333 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 OR4F15Q8NGB8 312 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 OR2G3Q8NGZ4 309 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 FAM151AQ8WW52 585 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 P2RX4Q99571 388 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 ECSITQ9BQ95 431 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 PXMP2Q9NR77 195 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 MTRF1LQ9UGC7 380 aaKnown RBP1.81□□□□□ -2.12
CHD9-209ENST00000564255 SHPKQ9UHJ6 478 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 CAMTA1Q9Y6Y1 1673 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 COL2A1P02458 1487 aaPredicted RBP1.81□□□□□ -2.12
CHD9-209ENST00000564255 CEMIPQ8WUJ3 1361 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 PIK3R4Q99570 1358 aa1.81□□□□□ -2.12
CHD9-209ENST00000564255 GLYATL1P3A0A0U1RQE8 302 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 SPOPO43791 374 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 NPIPB7O75200 414 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 SRP72O76094 671 aaKnown RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 UBCP0CG48 685 aaKnown RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 CRISP2P16562 243 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 OR1E1P30953 314 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 DNAJC3Q13217 504 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 ORC2Q13416 577 aaPredicted RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 LRRC10Q5BKY1 277 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 RSBN1Q5VWQ0 802 aaPredicted RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 LCN12Q6JVE5 192 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 ZNF544Q6NX49 715 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 RNF165Q6ZSG1 346 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 ZBED8Q8IZ13 594 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 LYG1Q8N1E2 194 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 LRRC75AQ8NAA5 344 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 PROKR2Q8NFJ6 384 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 OR2A1Q8NGT9 310 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 LINC01006Q8NI28 216 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 SDR42E1Q8WUS8 393 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 MITD1Q8WV92 249 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 ANKRD9Q96BM1 317 aaPredicted RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 AURKBQ96GD4 344 aaPredicted RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 C9orf72Q96LT7 481 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 MAGEB18Q96M61 343 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 HES7Q9BYE0 225 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 OR2AG1Q9H205 316 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 EML4Q9HC35 981 aaKnown RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 RETNQ9HD89 108 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 MYEF2Q9P2K5 600 aaKnown RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 SERPINE3A8MV23 424 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 F6UB75 175 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 SMKR1H3BMG3 65 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 PEX7O00628 323 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 BCKDKO14874 412 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 UTS2O95399 124 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 IVLP07476 585 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 HRH1P35367 487 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 CTRLP40313 264 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 NBL1P41271 181 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 SH3BGRP55822 239 aaPredicted RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 PRPS1P60891 318 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 LYZP61626 148 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 RPS21P63220 83 aaKnown RBP1.8□□□□□ -2.12
CHD9-209ENST00000564255 SP4Q02446 784 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 HERPUD1Q15011 391 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 SLC1A5Q15758 541 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 ZNF726P1Q15940 193 aa1.8□□□□□ -2.12
CHD9-209ENST00000564255 SGCAQ16586 387 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms