RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 C1QL2Q7Z5L3 287 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 TREML1Q86YW5 311 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 OR4D11Q8NGI4 311 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 NANPQ8TBE9 248 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 CCL17Q92583 94 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 ELMOD3Q96FG2 381 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 TMPRSS13Q9BYE2 586 aa11.06□□□□□ -0.64
SF3B3-202ENST00000562722 TMEM89A2RUT3 159 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 C5orf49A4QMS7 147 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 J3QLI3 93 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 TRMUO75648 421 aaKnown RBP11.05□□□□□ -0.64
SF3B3-202ENST00000562722 LYPD3O95274 346 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 SLC2A10O95528 541 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 IGHV2-5P01817 119 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 ACADSP16219 412 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 MAKP20794 623 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 STOMP27105 288 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 CDAP32320 146 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 AQP2P41181 271 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 LIMS1P48059 325 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 COMPP49747 757 aaPredicted RBP11.05□□□□□ -0.64
SF3B3-202ENST00000562722 GDI2P50395 445 aaKnown RBP11.05□□□□□ -0.64
SF3B3-202ENST00000562722 TAS2R41P59536 307 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 CD47Q08722 323 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 NFYCQ13952 458 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 SGCAQ16586 387 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 ZNF718Q3SXZ3 478 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 INTS11Q5TA45 600 aaKnown RBP11.05□□□□□ -0.64
SF3B3-202ENST00000562722 UNQ6126/PRO20091Q6UXV3 157 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 RETREG3Q86VR2 466 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 CPEB3Q8NE35 698 aaKnown RBP11.05□□□□□ -0.64
SF3B3-202ENST00000562722 PFN4Q8NHR9 129 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 SGMS2Q8NHU3 365 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 ASB10Q8WXI3 467 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 NSMAFQ92636 917 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 TAMM41Q96BW9 452 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 CGREF1Q99674 301 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 EGLN1Q9GZT9 426 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 C7orf69Q9H7B7 122 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 SIAEQ9HAT2 523 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 INIPQ9NRY2 104 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 UBAP1Q9NZ09 502 aa11.05□□□□□ -0.64
SF3B3-202ENST00000562722 WIPF1O43516 503 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 DEAF1O75398 565 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 OR7A10O76100 309 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 IGHV3-13P01766 116 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 MMP7P09237 267 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 FUT1P19526 365 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 PCGF2P35227 344 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 UGT2B15P54855 530 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 LCN2P80188 198 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 TOP3AQ13472 1001 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 HIST3H3Q16695 136 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 THEM4Q5T1C6 240 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 TSPYL5Q86VY4 417 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 ZNF101Q8IZC7 436 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 OR10A6Q8NH74 314 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 ST7LQ8TDW4 575 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 IPCEF1Q8WWN9 437 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 RASSF5Q8WWW0 418 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 C22orf15Q8WYQ4 148 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 SGTBQ96EQ0 304 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 THOC1Q96FV9 657 aaKnown RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 ZNF426Q9BUY5 554 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 MRPL13Q9BYD1 178 aaKnown RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 NANOGQ9H9S0 305 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 MEPEQ9NQ76 525 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 STX18Q9P2W9 335 aaKnown RBP11.04□□□□□ -0.64
SF3B3-202ENST00000562722 SH3GLB1Q9Y371 365 aa11.04□□□□□ -0.64
SF3B3-202ENST00000562722 CENPBD1B2RD01 187 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 MGRN1O60291 552 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 PRSS23O95084 383 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 IGHV1-46P01743 117 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 MT-ND1P03886 318 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 NR2C1P13056 603 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 ZNF32P17041 273 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 EGR1P18146 543 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 GATA3P23771 443 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 FPR2P25090 351 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 MPV17P39210 176 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 WNT5AP41221 380 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 ARFIP2P53365 341 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 ERVK-25P63136 954 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 MRPS34P82930 218 aaKnown RBP11.03□□□□□ -0.64
SF3B3-202ENST00000562722 FMODQ06828 376 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 SLC3A1Q07837 685 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 FAM209AQ5JX71 171 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 C10orf128Q5T292 105 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 AGBL2Q5U5Z8 902 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 RBMS3Q6XE24 437 aaKnown RBP11.03□□□□□ -0.64
SF3B3-202ENST00000562722 DPP10Q8N608 796 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 AKR7LQ8NHP1 331 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 MOSPD2Q8NHP6 518 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 ABHD4Q8TB40 342 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 SLC25A40Q8TBP6 338 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 TMEM255BQ8WV15 326 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 PRSS27Q9BQR3 290 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 OR2J1Q9GZK6 312 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 PCDHAC1Q9H158 963 aa11.03□□□□□ -0.64
SF3B3-202ENST00000562722 KAT8Q9H7Z6 458 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms