RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SH3GL3Q99963 347 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 SYT4Q9H2B2 425 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 TBC1D23Q9NUY8 699 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 FBXL3Q9UKT7 428 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 AKAP6Q13023 2319 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 CELA3BP08861 270 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 ANXA8P13928 327 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 HIST1H1CP16403 213 aaKnown RBP14.53□□□□□ -0.08
CLK3-207ENST00000562389 CTLA4P16410 223 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 ZNF14P17017 642 aaPredicted RBP14.53□□□□□ -0.08
CLK3-207ENST00000562389 CD53P19397 219 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 NOS3P29474 1203 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 GIPRP48546 466 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 PTDSS1P48651 473 aaKnown RBP14.53□□□□□ -0.08
CLK3-207ENST00000562389 RAB1AP62820 205 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 PIGFQ07326 219 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 KPNB1Q14974 876 aaKnown RBP14.53□□□□□ -0.08
CLK3-207ENST00000562389 SLC36A2Q495M3 483 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 FAM27BQ5VT28 67 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 SLC16A14Q7RTX9 510 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 HS3ST5Q8IZT8 346 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 OR5K1Q8NHB7 308 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 FGFBP3Q8TAT2 258 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 MBD6Q96DN6 1003 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 RAB3IPQ96QF0 476 aaPredicted RBP14.53□□□□□ -0.08
CLK3-207ENST00000562389 KCNS3Q9BQ31 491 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 BDH2Q9BUT1 245 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 SEC61A2Q9H9S3 476 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 CISD1Q9NZ45 108 aaKnown RBP14.53□□□□□ -0.08
CLK3-207ENST00000562389 BAIAP2Q9UQB8 552 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 ANKRD17O75179 2603 aaKnown RBP14.53□□□□□ -0.08
CLK3-207ENST00000562389 SPG11Q96JI7 2443 aa14.53□□□□□ -0.08
CLK3-207ENST00000562389 PDZD2O15018 2839 aa14.52□□□□□ -0.08
CLK3-207ENST00000562389 ROS1P08922 2347 aa14.52□□□□□ -0.08
CLK3-207ENST00000562389 A0A1W2PPL8 197 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 ATP6V1G2-DDX39BF2Z307 99 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 KHDRBS3O75525 346 aaKnown RBP14.52□□□□□ -0.09
CLK3-207ENST00000562389 SOX14O95416 240 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 RENP00797 406 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 CRYAAP02489 173 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 IGFBP1P08833 259 aaPredicted RBP14.52□□□□□ -0.09
CLK3-207ENST00000562389 PATE4P0C8F1 98 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 GUCA1AP43080 201 aaPredicted RBP14.52□□□□□ -0.09
CLK3-207ENST00000562389 ETFDHQ16134 617 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 SGCAQ16586 387 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 TMEM53Q6P2H8 277 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 LEG1Q6P5S2 330 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 B3GLCTQ6Y288 498 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 LNX2Q8N448 690 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 LRRC18Q8N456 261 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 IL17RDQ8NFM7 739 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 OR4K13Q8NH42 304 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 IGFBPL1Q8WX77 278 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 NMNAT3Q96T66 252 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 CCL19Q99731 98 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 TSSK6Q9BXA6 273 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 KCNN2Q9H2S1 579 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 ZNF556Q9HAH1 456 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 REV1Q9UBZ9 1251 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 POU2F3Q9UKI9 436 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 MOKQ9UQ07 419 aa14.52□□□□□ -0.09
CLK3-207ENST00000562389 CSMD1Q96PZ7 3565 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 IGHV2OR16-5A0A0B4J2B6 119 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 E7EQL1 145 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 SLC16A7O60669 478 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 TMCC2O75069 709 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 CST2P09228 141 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 MMP7P09237 267 aaPredicted RBP14.51□□□□□ -0.09
CLK3-207ENST00000562389 DANCRP0C864 163 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 MSR1P21757 451 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 PRKACGP22612 351 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 CRABP1P29762 137 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 CALCRP30988 508 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.51□□□□□ -0.09
CLK3-207ENST00000562389 SLC36A3Q495N2 470 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 DNM1P34Q6PK57 102 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 SDR9C7Q8NEX9 313 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 OR2T33Q8NG76 320 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 OR4Q3Q8NH05 313 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 TEX47Q8TBZ9 253 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 DNAJC9Q8WXX5 260 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 LRTOMTQ8WZ04 291 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 PIGTQ969N2 578 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 DHRS9Q9BPW9 319 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 NUAK2Q9H093 628 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 RACGAP1Q9H0H5 632 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 RNF121Q9H920 327 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 POLE4Q9NR33 117 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 BEX4Q9NWD9 120 aaPredicted RBP14.51□□□□□ -0.09
CLK3-207ENST00000562389 POLQO75417 2590 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 NAV2Q8IVL1 2488 aa14.51□□□□□ -0.09
CLK3-207ENST00000562389 SERPINA5P05154 406 aa14.5□□□□□ -0.09
CLK3-207ENST00000562389 OSMP13725 252 aa14.5□□□□□ -0.09
CLK3-207ENST00000562389 LAP3P28838 519 aa14.5□□□□□ -0.09
CLK3-207ENST00000562389 RAB39AQ14964 217 aa14.5□□□□□ -0.09
CLK3-207ENST00000562389 DEFB113Q30KQ7 82 aa14.5□□□□□ -0.09
CLK3-207ENST00000562389 PGGHGQ32M88 737 aa14.5□□□□□ -0.09
CLK3-207ENST00000562389 SLC35F1Q5T1Q4 408 aa14.5□□□□□ -0.09
CLK3-207ENST00000562389 ZNF544Q6NX49 715 aa14.5□□□□□ -0.09
CLK3-207ENST00000562389 ZFP1Q6P2D0 407 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms