RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 INPP5JQ15735 1006 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 NDUFAF6Q330K2 333 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 TMEM244Q5VVB8 128 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 ENPP7Q6UWV6 458 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 CLEC9AQ6UXN8 241 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 ZNF433Q8N7K0 673 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 SDR9C7Q8NEX9 313 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 OR5AP2Q8NGF4 316 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 SCARF2Q96GP6 870 aaPredicted RBP12.08□□□□□ -0.48
CLK3-206ENST00000562078 MESP1Q9BRJ9 268 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 CHST5Q9GZS9 411 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 POFUT1Q9H488 388 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 SMOC1Q9H4F8 434 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 SYNPO2LQ9H987 977 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 TMEM100Q9NV29 134 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 ADAM29Q9UKF5 820 aa12.08□□□□□ -0.48
CLK3-206ENST00000562078 GLOD5A6NK44 160 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 IDSB3KWA1 339 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 ERI3O43414 337 aaKnown RBP12.07□□□□□ -0.48
CLK3-206ENST00000562078 PMP2P02689 132 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 G0S2P27469 103 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 PTGER1P34995 402 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 OMPP47874 163 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 ACY1Q03154 408 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 NIPAL3Q6P499 406 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 RFLNBQ8N5W9 214 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 CCL4L1Q8NHW4 92 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 TSACCQ96A04 125 aaPredicted RBP12.07□□□□□ -0.48
CLK3-206ENST00000562078 S100A16Q96FQ6 103 aaKnown RBP12.07□□□□□ -0.48
CLK3-206ENST00000562078 SHDQ96IW2 340 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 HSPA12BQ96MM6 686 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 IP6K3Q96PC2 410 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 FOXQ1Q9C009 403 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
CLK3-206ENST00000562078 MEIS3P1A6NDR6 274 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 RNASEK-C17orf49H0YIS7 233 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 AGPAT2O15120 278 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 CD74P04233 296 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 FRKP42685 505 aaPredicted RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 TAS2R41P59536 307 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 TAS2R20P59543 309 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 PLA2G7Q13093 441 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 COL9A2Q14055 689 aaPredicted RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 NFATC4Q14934 902 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 ABHD13Q7L211 337 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 PPP1R3BQ86XI6 285 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 FAM24BQ8N5W8 94 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 ZNF511Q8NB15 262 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 OR4E2Q8NGC2 313 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 OR5T3Q8NGG3 340 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 OR6N1Q8NGY5 312 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 OR2G2Q8NGZ5 317 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 RNF141Q8WVD5 230 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 PPP1R1CQ8WVI7 109 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 RGP1Q92546 391 aaPredicted RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 SAMD8Q96LT4 415 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 MRPL37Q9BZE1 423 aaKnown RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 NRSN2Q9GZP1 204 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 DUSP15Q9H1R2 295 aaPredicted RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 FBXO4Q9UKT5 387 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 TRBV23OR9-2A0A075B6M9 112 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 CPSF4LA6NMK7 179 aaKnown RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 OR10H2O60403 315 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 SNRNP70P08621 437 aaKnown RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 HCKP08631 526 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 S100A2P29034 98 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 MAGEB1P43366 347 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 LSM6P62312 80 aaKnown RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 ZNF85Q03923 595 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 FAM111BQ6SJ93 734 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 IL34Q6ZMJ4 242 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 MEPCEQ7L2J0 689 aaKnown RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 SYT13Q7L8C5 426 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 LCN9Q8WX39 176 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 KISS1RQ969F8 398 aaPredicted RBP12.06□□□□□ -0.48
CLK3-206ENST00000562078 MS4A6EQ96DS6 147 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 AKR1E2Q96JD6 320 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 WDR92Q96MX6 357 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 TEX12Q9BXU0 123 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 KIR3DX1Q9H7L2 352 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 COMMD9Q9P000 198 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 WNT16Q9UBV4 365 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 CACFD1Q9UGQ2 172 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 HEBP2Q9Y5Z4 205 aa12.06□□□□□ -0.48
CLK3-206ENST00000562078 IFITM5A6NNB3 132 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 ARL6IP5O75915 188 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 IFNA2P01563 188 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 HOXB5P09067 269 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 SLC25A4P12235 298 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 HOXA5P20719 270 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 CMPK1P30085 196 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 PMELP40967 661 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 GLP1RP43220 463 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 RAB4BP61018 213 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 ZIC1Q15915 447 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 TMEM35AQ53FP2 167 aa12.05□□□□□ -0.48
CLK3-206ENST00000562078 YOD1Q5VVQ6 348 aaPredicted RBP12.05□□□□□ -0.48
CLK3-206ENST00000562078 LIN54Q6MZP7 749 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms