RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 SLC25A47Q6Q0C1 308 aa21.68■■□□□ 1.06
NME3-202ENST00000561637 CPEB3Q8NE35 698 aaKnown RBP21.68■■□□□ 1.06
NME3-202ENST00000561637 GEMIN6Q8WXD5 167 aaKnown RBP21.68■■□□□ 1.06
NME3-202ENST00000561637 EFCAB1Q9HAE3 211 aa21.68■■□□□ 1.06
NME3-202ENST00000561637 MYOZ1Q9NP98 299 aaPredicted RBP21.68■■□□□ 1.06
NME3-202ENST00000561637 SLC7A8Q9UHI5 535 aa21.68■■□□□ 1.06
NME3-202ENST00000561637 DUSP13Q9UII6 198 aa21.68■■□□□ 1.06
NME3-202ENST00000561637 A0A087WUU8 490 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 H7C1C5 153 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 M0R233 179 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 LILRA1O75019 489 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 NCR1O76036 304 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 SAGP10523 405 aaPredicted RBP21.67■■□□□ 1.06
NME3-202ENST00000561637 NAT2P11245 290 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 ZNF23P17027 643 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 CTXN1P60606 82 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 PSME3P61289 254 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 LCN6P62502 163 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 TRAM2Q15035 370 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 SLC36A2Q495M3 483 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 ELFN2Q5R3F8 820 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 HACD2Q6Y1H2 254 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 ZNF786Q8N393 782 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 FAM86B1Q8N7N1 296 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 UBASH3BQ8TF42 649 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 GTF3AQ92664 365 aaKnown RBP21.67■■□□□ 1.06
NME3-202ENST00000561637 HOPXQ9BPY8 73 aaPredicted RBP21.67■■□□□ 1.06
NME3-202ENST00000561637 KCTD14Q9BQ13 255 aaPredicted RBP21.67■■□□□ 1.06
NME3-202ENST00000561637 CDH20Q9HBT6 801 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 EGFL7Q9UHF1 273 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 FBXL3Q9UKT7 428 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 KCNS2Q9ULS6 477 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 AP3M1Q9Y2T2 418 aa21.67■■□□□ 1.06
NME3-202ENST00000561637 LOC100289279A0A1B0GTE1 492 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 CENPBD1B2RD01 187 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 CDC42EP2O14613 210 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 MGRN1O60291 552 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 GIFP27352 417 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 GZMKP49863 264 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 RPL27P61353 136 aaKnown RBP21.66■■□□□ 1.06
NME3-202ENST00000561637 PRKCDQ05655 676 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 RIN1Q13671 783 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 SGCAQ16586 387 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 PABPC1L2AQ5JQF8 200 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 FAM166AQ6J272 317 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 FKBP9P1Q75LS8 142 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 RNF148Q8N7C7 305 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 AKR7LQ8NHP1 331 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 ZNF519Q8TB69 540 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 FAM162AQ96A26 154 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 SNX18Q96RF0 628 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 ABCD2Q9UBJ2 740 aa21.66■■□□□ 1.06
NME3-202ENST00000561637 A0A1W2PPW3 197 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 NPIPB13A6NJU9 1138 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 EFCAB9A8MZ26 197 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 NPIPB4C9JG80 1138 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 IGHMP01871 453 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 ZNF32P17041 273 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 DRD4P21917 467 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 COL8A2P25067 703 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 EVX1P49640 407 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 GYS2P54840 703 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 MRPS34P82930 218 aaKnown RBP21.65■■□□□ 1.06
NME3-202ENST00000561637 HDDC2Q7Z4H3 204 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 ACOT11Q8WXI4 607 aaPredicted RBP21.65■■□□□ 1.06
NME3-202ENST00000561637 C1orf159Q96HA4 380 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 PLA2G12AQ9BZM1 189 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 SIAEQ9HAT2 523 aa21.65■■□□□ 1.06
NME3-202ENST00000561637 SCG5P05408 212 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 LSP1P33241 339 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 RPS23P62266 143 aaKnown RBP21.64■■□□□ 1.05
NME3-202ENST00000561637 ERVK-25P63136 954 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 GLO1Q04760 184 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 TMEM255AQ5JRV8 349 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 RGS7BPQ6MZT1 257 aaPredicted RBP21.64■■□□□ 1.05
NME3-202ENST00000561637 ZNF730Q6ZMV8 503 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 FAM156AQ8NDB6 213 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 ICA1LQ8NDH6 482 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 YIPF5Q969M3 257 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 FBXO9Q9UK97 447 aaPredicted RBP21.64■■□□□ 1.05
NME3-202ENST00000561637 ADAM18Q9Y3Q7 739 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 ENPP4Q9Y6X5 453 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 TENM1Q9UKZ4 2725 aa21.64■■□□□ 1.05
NME3-202ENST00000561637 DIRAS1O95057 198 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 LCKP06239 509 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 ERCC1P07992 297 aaPredicted RBP21.63■■□□□ 1.05
NME3-202ENST00000561637 MAGEB1P43366 347 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 HSF2Q03933 536 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 CCNIQ14094 377 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 TBC1D28Q2M2D7 210 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 NRN1LQ496H8 165 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 LIPNQ5VXI9 398 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 OTPQ5XKR4 325 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 MBOAT2Q6ZWT7 520 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 OAFQ86UD1 273 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 ALG12Q9BV10 488 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 NMNAT1Q9HAN9 279 aaPredicted RBP21.63■■□□□ 1.05
NME3-202ENST00000561637 SMURF2Q9HAU4 748 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 TAAR3PQ9P1P4 343 aa21.63■■□□□ 1.05
NME3-202ENST00000561637 LOC100509620A0A075B734 347 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms