RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MLLT11Q13015 90 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 ETFDHQ16134 617 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 LINC00303Q3SY05 128 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 TIMM50Q3ZCQ8 353 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 TEX30Q5JUR7 227 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 RIPPLY2Q5TAB7 128 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 GPR107Q5VW38 600 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 OR2A2Q6IF42 318 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 SLC18B1Q6NT16 456 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 KCTD18Q6PI47 426 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 LRFN4Q6PJG9 635 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ZNF322Q6U7Q0 402 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 CLVS1Q8IUQ0 354 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 TIGD4Q8IY51 512 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 TMEM123Q8N131 208 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 SYS1Q8N2H4 156 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 KDF1Q8NAX2 398 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 SLC26A10Q8NG04 563 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 OR6N2Q8NGY6 317 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ABHD3Q8WU67 409 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 THEM6Q8WUY1 208 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 GATAD2BQ8WXI9 593 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ASB17Q8WXJ9 295 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ZNF775Q96BV0 537 aaPredicted RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 GPR137Q96N19 417 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 OR5M11Q96RB7 305 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 ULBP2Q9BZM5 246 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 CALHM2Q9HA72 323 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 BCO1Q9HAY6 547 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 BABAM2Q9NXR7 383 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 TAS2R16Q9NYV7 291 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 KCNG2Q9UJ96 466 aa9.14□□□□□ -0.95
USP3-219ENST00000561326 LSM2Q9Y333 95 aaKnown RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 INTS1Q8N201 2190 aaKnown RBP9.14□□□□□ -0.95
USP3-219ENST00000561326 SULT1C4O75897 302 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 AQP8O94778 261 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 TFP02787 698 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 KRT8P05787 483 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 ADRA2AP08913 450 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 SPARCP09486 303 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 CPEP16870 476 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 NPR2P20594 1047 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 RGS6P49758 472 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 SELENOPP49908 381 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 GBX2P52951 348 aaPredicted RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 HCCSP53701 268 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 TAS2R43P59537 309 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 BDH1Q02338 343 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 EGR3Q06889 387 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 MRPL28Q13084 256 aaKnown RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 GPR50Q13585 617 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 KCNMB1Q16558 191 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 C3AR1Q16581 482 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 CDONQ4KMG0 1287 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 C10orf128Q5T292 105 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 OR2G6Q5TZ20 316 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 DPY19L4Q7Z388 723 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 ABHD12BQ7Z5M8 362 aaPredicted RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 CDC20BQ86Y33 519 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 TUSC5Q8IXB3 177 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 ZNF100Q8IYN0 542 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 CISD2Q8N5K1 135 aaKnown RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 OR2AJ1Q8NGZ0 328 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 OTOSQ8NHW6 89 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 CPT1CQ8TCG5 803 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 RAB2BQ8WUD1 216 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 UFD1Q92890 307 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 WNT2BQ93097 391 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 NMD3Q96D46 503 aaKnown RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 GMPPAQ96IJ6 420 aaPredicted RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 TRIB1Q96RU8 372 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 BCL7BQ9BQE9 202 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 TTYH2Q9BSA4 534 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 FUNDC2Q9BWH2 189 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 RBM24Q9BX46 236 aaKnown RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 LINC00470Q9BZP3 86 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 SLCO5A1Q9H2Y9 848 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 TRIM36Q9NQ86 728 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 RSL24D1Q9UHA3 163 aaKnown RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 FOXD3Q9UJU5 478 aaPredicted RBP9.13□□□□□ -0.95
USP3-219ENST00000561326 POLR1DQ9Y2S0 133 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 CEPT1Q9Y6K0 416 aa9.13□□□□□ -0.95
USP3-219ENST00000561326 CELSR3Q9NYQ7 3312 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 METTL15A6NJ78 407 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 HSPB2A8KAH6 182 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 WDR1O75083 606 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 ALOX5APP20292 161 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 PSMA1P25786 263 aaKnown RBP9.12□□□□□ -0.95
USP3-219ENST00000561326 LSM6P62312 80 aaKnown RBP9.12□□□□□ -0.95
USP3-219ENST00000561326 ZNF85Q03923 595 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 DBPQ10586 325 aaPredicted RBP9.12□□□□□ -0.95
USP3-219ENST00000561326 KLRB1Q12918 225 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 TPBGQ13641 420 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 STK11Q15831 433 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 HSPB2Q16082 182 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 SGCAQ16586 387 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 TSTQ16762 297 aaKnown RBP9.12□□□□□ -0.95
USP3-219ENST00000561326 CCDC58Q4VC31 144 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 ZNF544Q6NX49 715 aa9.12□□□□□ -0.95
USP3-219ENST00000561326 ZNF585AQ6P3V2 769 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms