RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 PERPQ96FX8 193 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 ZNF570Q96NI8 536 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 TSSK2Q96PF2 358 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 DHRS9Q9BPW9 319 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 LRMDAQ9H2I8 198 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 NTN4Q9HB63 628 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 GRHPRQ9UBQ7 328 aa12.04□□□□□ -0.48
TPM1-230ENST00000561266 SAMHD1Q9Y3Z3 626 aaKnown RBP12.04□□□□□ -0.48
TPM1-230ENST00000561266 PRSS37A4D1T9 235 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 A6NIZ1 184 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 FKBP6O75344 327 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 MPZL1O95297 269 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 CCL2P13500 99 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 ZNF35P13682 527 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 HIST1H1CP16403 213 aaKnown RBP12.03□□□□□ -0.48
TPM1-230ENST00000561266 SDHAP31040 664 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 TTKP33981 857 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 ARR3P36575 388 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 PTH2RP49190 550 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 FABP6P51161 128 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 RAP1BP61224 184 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 RAP1AP62834 184 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 ENDOGQ14249 297 aaKnown RBP12.03□□□□□ -0.48
TPM1-230ENST00000561266 ZNF362Q5T0B9 420 aaPredicted RBP12.03□□□□□ -0.48
TPM1-230ENST00000561266 THEM4Q5T1C6 240 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 HDDC2Q7Z4H3 204 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 CCDC36Q8IYA8 594 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 AQP11Q8NBQ7 271 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 CPEB3Q8NE35 698 aaKnown RBP12.03□□□□□ -0.48
TPM1-230ENST00000561266 PIGTQ969N2 578 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 ERMAPQ96PL5 475 aaPredicted RBP12.03□□□□□ -0.48
TPM1-230ENST00000561266 RBP7Q96R05 134 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 SYT4Q9H2B2 425 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 REEP1Q9H902 201 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 SMURF2Q9HAU4 748 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 EMC7Q9NPA0 242 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 ZNF701Q9NV72 531 aaPredicted RBP12.03□□□□□ -0.48
TPM1-230ENST00000561266 VSX1Q9NZR4 365 aaPredicted RBP12.03□□□□□ -0.48
TPM1-230ENST00000561266 POU2F3Q9UKI9 436 aa12.03□□□□□ -0.48
TPM1-230ENST00000561266 SMPD2O60906 423 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 ATP5HO75947 161 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 PAX1P15863 534 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 ZNF32P17041 273 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 PRKACGP22612 351 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 LAP3P28838 519 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 THBS4P35443 961 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 ZNF84P51523 738 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 NKX6-1P78426 367 aaPredicted RBP12.02□□□□□ -0.49
TPM1-230ENST00000561266 CLEC12AQ5QGZ9 265 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 SLC35F1Q5T1Q4 408 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 FAM205BPQ63HN1 556 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 VHLLQ6RSH7 139 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 SLC16A14Q7RTX9 510 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 OR4Q3Q8NH05 313 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 OR4K13Q8NH42 304 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 TMEM171Q8WVE6 324 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 ZNRF4Q8WWF5 429 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 NMNAT3Q96T66 252 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 DDOQ99489 341 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 IFT27Q9BW83 186 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 NUAK2Q9H093 628 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 FN3KQ9H479 309 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 DENND2DQ9H6A0 471 aaPredicted RBP12.02□□□□□ -0.49
TPM1-230ENST00000561266 SIAEQ9HAT2 523 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 KRCC1Q9NPI7 259 aaPredicted RBP12.02□□□□□ -0.49
TPM1-230ENST00000561266 STX18Q9P2W9 335 aaKnown RBP12.02□□□□□ -0.49
TPM1-230ENST00000561266 REV1Q9UBZ9 1251 aa12.02□□□□□ -0.49
TPM1-230ENST00000561266 GDF2Q9UK05 429 aaPredicted RBP12.02□□□□□ -0.49
TPM1-230ENST00000561266 FLNAP21333 2647 aaKnown RBP12.01□□□□□ -0.49
TPM1-230ENST00000561266 A0A1W2PPL8 197 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 TMEM129A0AVI4 362 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 BHLHE40O14503 412 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 ARPC3O15145 178 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 GPRIN2O60269 458 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 SLC16A7O60669 478 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 TIPRLO75663 272 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 UBL3O95164 117 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 SOX14O95416 240 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 CRYAAP02489 173 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 SLC6A6P31641 620 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 PSG4Q00888 419 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 ADIPOQQ15848 244 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 FAM27BQ5VT28 67 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 GPR139Q6DWJ6 353 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 KRT80Q6KB66 452 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 RASSF6Q6ZTQ3 369 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 MUC15Q8N387 334 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 OR10G2Q8NGC3 310 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 AKR7LQ8NHP1 331 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 FEVQ99581 238 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 ZNF416Q9BWM5 594 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 DGCR6LQ9BY27 220 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 GSX2Q9BZM3 304 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 WNT5BQ9H1J7 359 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 POLE4Q9NR33 117 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 CA10Q9NS85 328 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 ARMC1Q9NVT9 282 aa12.01□□□□□ -0.49
TPM1-230ENST00000561266 IL20Q9NYY1 176 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms