RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 PPP1R3DO95685 299 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 RENP00797 406 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 CD14P08571 375 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 CELA3BP08861 270 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 PATE4P0C8F1 98 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 PAX7P23759 505 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 SLC6A6P31641 620 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 CDAP32320 146 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 ARR3P36575 388 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 CDKN1AP38936 164 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 ARHGDIAP52565 204 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 ATP5J2P56134 94 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 RAB1AP62820 205 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 RUNX1T1Q06455 604 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 BNIP1Q12981 228 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 KRR1Q13601 381 aaKnown RBP6.97□□□□□ -1.29
LRRC28-219ENST00000560483 FXNQ16595 210 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 CLEC12AQ5QGZ9 265 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 THEM4Q5T1C6 240 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 AGAP6Q5VW22 663 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 OR2T5Q6IEZ7 315 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 TMPRSS11FQ6ZWK6 438 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 PIWIL3Q7Z3Z3 882 aaKnown RBP6.97□□□□□ -1.29
LRRC28-219ENST00000560483 WDFY1Q8IWB7 410 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 LINC00471Q8N535 108 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 CLDN22Q8N7P3 220 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 AQP11Q8NBQ7 271 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 OR9Q2Q8NGE9 314 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 OR2T29Q8NH02 315 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 FNDC8Q8TC99 324 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 UBASH3BQ8TF42 649 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 LIPHQ8WWY8 451 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 HDAC2Q92769 488 aaKnown RBP6.97□□□□□ -1.29
LRRC28-219ENST00000560483 OTULINQ96BN8 352 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 RASD2Q96D21 266 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 FBXO17Q96EF6 278 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 TRMT61AQ96FX7 289 aaKnown RBP6.97□□□□□ -1.29
LRRC28-219ENST00000560483 Q96M85 177 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 FOXN4Q96NZ1 517 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 ERMAPQ96PL5 475 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-219ENST00000560483 ALG12Q9BV10 488 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 CHID1Q9BWS9 393 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 LRMDAQ9H2I8 198 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 OR51B6Q9H340 312 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 CDH20Q9HBT6 801 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 TBC1D23Q9NUY8 699 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 TMEM38BQ9NVV0 291 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 BEX4Q9NWD9 120 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-219ENST00000560483 KIF17Q9P2E2 1029 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 SPEF1Q9Y4P9 236 aa6.97□□□□□ -1.29
LRRC28-219ENST00000560483 HRNRQ86YZ3 2850 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-219ENST00000560483 ARPC4-TTLL3A0A0A6YYG9 625 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 IGHV1-18A0A0C4DH31 117 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 TCRBV5S2A0A599 114 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 AQP12BA6NM10 295 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 CENPBD1B2RD01 187 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 SHISA9B4DS77 424 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 H3BN98 237 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 GSC2O15499 205 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 FZD7O75084 574 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 HLA-DQA2P01906 255 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 SEMG1P04279 462 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 CECR9P0C854 216 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 CBR1P16152 277 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 CD53P19397 219 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 NPR2P20594 1047 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 POU1F1P28069 291 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 APLNRP35414 380 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 OMPP47874 163 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 NKX6-1P78426 367 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-219ENST00000560483 SNTB2Q13425 540 aaKnown RBP6.96□□□□□ -1.3
LRRC28-219ENST00000560483 RAB39AQ14964 217 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 Q5PR19 223 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 ARMC4Q5T2S8 1044 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 GPR139Q6DWJ6 353 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 KRT80Q6KB66 452 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 LEG1Q6P5S2 330 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 LRFN4Q6PJG9 635 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 DNM1P34Q6PK57 102 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 DPY19L2P2Q6ZN68 376 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 TSEN54Q7Z6J9 526 aaKnown RBP6.96□□□□□ -1.3
LRRC28-219ENST00000560483 ZER1Q7Z7L7 766 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 SKA3Q8IX90 412 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 AQP12AQ8IXF9 295 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 MUC15Q8N387 334 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 ARIH2OSQ8N7S6 290 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 ZNF611Q8N823 705 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 OR10G2Q8NGC3 310 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 MAGEE2Q8TD90 523 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-219ENST00000560483 CANT1Q8WVQ1 401 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 SLC7A6OSQ96CW6 309 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-219ENST00000560483 SAMD8Q96LT4 415 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 DHRS9Q9BPW9 319 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 CADM1Q9BY67 442 aaKnown RBP6.96□□□□□ -1.3
LRRC28-219ENST00000560483 OR52D1Q9H346 318 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 ZNF556Q9HAH1 456 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 PDP1Q9P0J1 537 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-219ENST00000560483 FBXL3Q9UKT7 428 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 POMPQ9Y244 141 aa6.96□□□□□ -1.3
LRRC28-219ENST00000560483 LYVE1Q9Y5Y7 322 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms