RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 GPR52Q9Y2T5 361 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 MPDZO75970 2070 aa10.43□□□□□ -0.74
LDLR-212ENST00000560467 PRSS37A4D1T9 235 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 E9PQ18 207 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 H7C1Q1 480 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 SLC1A7O00341 560 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 CYTIPO60759 359 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 MRPS14O60783 128 aaKnown RBP10.42□□□□□ -0.74
LDLR-212ENST00000560467 FZD7O75084 574 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 ENTPD6O75354 484 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 SLC43A1O75387 559 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 SMNDC1O75940 238 aaKnown RBP eCLIP10.42□□□□□ -0.74
LDLR-212ENST00000560467 IL18BPO95998 194 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 TMIGD3P0DMS9 266 aaPredicted RBP10.42□□□□□ -0.74
LDLR-212ENST00000560467 PCSK6P29122 969 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 FMO3P31513 532 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 MTNR1AP48039 350 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 SLC25A1P53007 311 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 CLDN17P56750 224 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 FXYD6P3P58550 94 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 GABARAPL2P60520 117 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 FHL1Q13642 323 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 CRMP1Q14194 572 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 CTU2Q2VPK5 515 aaKnown RBP10.42□□□□□ -0.74
LDLR-212ENST00000560467 SLC35D3Q5M8T2 416 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 TMEM201Q5SNT2 666 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 THEM4Q5T1C6 240 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 SHEQ5VZ18 495 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 CREB3L2Q70SY1 520 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 MEPCEQ7L2J0 689 aaKnown RBP10.42□□□□□ -0.74
LDLR-212ENST00000560467 AAED1Q7RTV5 226 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 LUZP2Q86TE4 346 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 SDR9C7Q8NEX9 313 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 PROKR2Q8NFJ6 384 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 TSPAN14Q8NG11 270 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 FBLIM1Q8WUP2 373 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 ROBO4Q8WZ75 1007 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 UBE2FQ969M7 185 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 RASD2Q96D21 266 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 ADGRG7Q96K78 797 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 COX4I2Q96KJ9 171 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 ZNF582Q96NG8 517 aaPredicted RBP10.42□□□□□ -0.74
LDLR-212ENST00000560467 DACH2Q96NX9 599 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 TSPAN32Q96QS1 320 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 NMNAT3Q96T66 252 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 ALG12Q9BV10 488 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 GP6Q9HCN6 339 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 ASB6Q9NWX5 421 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 CNOT2Q9NZN8 540 aaKnown RBP10.42□□□□□ -0.74
LDLR-212ENST00000560467 DNAJC27Q9NZQ0 273 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 KLHL13Q9P2N7 655 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 SEC14L4Q9UDX3 406 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 EML6Q6ZMW3 1958 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 ATRQ13535 2644 aa10.42□□□□□ -0.74
LDLR-212ENST00000560467 HEATR5AQ86XA9 2040 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 KIAA1549Q9HCM3 1950 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 NCKAP5O14513 1909 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 MED12Q93074 2177 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 HIVEP2P31629 2446 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 IGHV3-15A0A0B4J1V0 119 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 H0YC42 278 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 SMAD9O15198 467 aaKnown RBP10.41□□□□□ -0.74
LDLR-212ENST00000560467 RGS10O43665 173 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 MRPL33O75394 65 aaKnown RBP10.41□□□□□ -0.74
LDLR-212ENST00000560467 GOSR1O95249 250 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 HLA-DQA2P01906 255 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 YES1P07947 543 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 LYNP07948 512 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 MYL12AP19105 171 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 HTR1FP30939 366 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 APOFQ13790 326 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 SLC17A1Q14916 467 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 FAM122BQ7Z309 247 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 GCNT2Q8N0V5 402 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 SVOPQ8N4V2 548 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 CYB561A3Q8NBI2 242 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 OR6K6Q8NGW6 343 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 ASB10Q8WXI3 467 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 UCN2Q96RP3 112 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 TM9SF2Q99805 663 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 TUBA1CQ9BQE3 449 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 COPS4Q9BT78 406 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 SRXN1Q9BYN0 137 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 CALHM2Q9HA72 323 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 SRA1Q9HD15 236 aaKnown RBP10.41□□□□□ -0.74
LDLR-212ENST00000560467 RPRD1BQ9NQG5 326 aaKnown RBP10.41□□□□□ -0.74
LDLR-212ENST00000560467 RCE1Q9Y256 329 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 NOSIPQ9Y314 301 aaKnown RBP10.41□□□□□ -0.74
LDLR-212ENST00000560467 COL6A5A8TX70 2615 aa10.41□□□□□ -0.74
LDLR-212ENST00000560467 SLC35F4A4IF30 521 aa10.4□□□□□ -0.74
LDLR-212ENST00000560467 FAM183AA6NL82 134 aa10.4□□□□□ -0.74
LDLR-212ENST00000560467 SMAD7O15105 426 aaKnown RBP10.4□□□□□ -0.74
LDLR-212ENST00000560467 SIAH2O43255 324 aa10.4□□□□□ -0.74
LDLR-212ENST00000560467 SLC16A7O60669 478 aa10.4□□□□□ -0.74
LDLR-212ENST00000560467 TMCC2O75069 709 aa10.4□□□□□ -0.74
LDLR-212ENST00000560467 KHDRBS3O75525 346 aaKnown RBP10.4□□□□□ -0.74
LDLR-212ENST00000560467 WBP4O75554 376 aaKnown RBP10.4□□□□□ -0.74
LDLR-212ENST00000560467 SLC2A10O95528 541 aa10.4□□□□□ -0.74
LDLR-212ENST00000560467 GABRB1P18505 474 aa10.4□□□□□ -0.74
LDLR-212ENST00000560467 CRHBPP24387 322 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms