RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PGA4P0DJD7 388 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 PGA3P0DJD8 388 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 POU3F2P20265 443 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 CRABP1P29762 137 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 FGF9P31371 208 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 NTF4P34130 210 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 SELENOPP49908 381 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 PMP22Q01453 160 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 PLGLB1Q02325 96 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 CAMK2BQ13554 666 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 DEFB109BQ30KR1 87 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 HBMQ6B0K9 141 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 DCXRQ7Z4W1 244 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 SYS1Q8N2H4 156 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 MFSD4AQ8N468 514 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 OR51A4Q8NGJ6 313 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 SLC25A44Q96H78 314 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 FAM173AQ9BQD7 235 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 MRPL13Q9BYD1 178 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 ELOVL3Q9HB03 270 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 BRD7Q9NPI1 651 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 CCDC59Q9P031 241 aaKnown RBP9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 BOKQ9UMX3 212 aaPredicted RBP9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 TRAPPC4Q9Y296 219 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 CACNA1GO43497 2377 aa9.68□□□□□ -0.86
SNRPA1-211ENST00000560433 A6NIZ1 184 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ZNF726A6NNF4 738 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 SMAD9O15198 467 aaKnown RBP9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ABHD16AO95870 558 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 KRT8P05787 483 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 SP1P08047 785 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 QDPRP09417 244 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 CD82P27701 267 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 SOX2P48431 317 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 MEOX1P50221 254 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 CARD18P57730 90 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 RAP1BP61224 184 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 RPS11P62280 158 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 RAP1AP62834 184 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 IFITM3Q01628 133 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 FAM220AQ7Z4H9 259 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 DTX3Q8N9I9 347 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 SLC26A10Q8NG04 563 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 OR10AC1Q8NH08 325 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 OR10D3Q8NH80 312 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 MCHR2Q969V1 340 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ZNF837Q96EG3 531 aaPredicted RBP9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 IP6K3Q96PC2 410 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 RBP7Q96R05 134 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ABHD6Q9BV23 337 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ZNF703Q9H7S9 590 aaPredicted RBP9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 COMMD3Q9UBI1 195 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 SLC22A13Q9Y226 551 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 DSPP15924 2871 aaKnown RBP9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 KIAA1549Q9HCM3 1950 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 OR5H15A6NDH6 313 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 NPIPA2E9PIF3 369 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 NPIPA3F8WFD2 350 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 OGG1O15527 345 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 WISP2O76076 250 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 PNPP00491 289 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 IGHG1P01857 330 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ZNF823P16415 610 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ZNF17P17021 662 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 S100A5P33763 92 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 TAS2R43P59537 309 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 HSF2Q03933 536 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 CLN3Q13286 438 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ZMAT1Q5H9K5 638 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 RPL22L1Q6P5R6 122 aaKnown RBP9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 LRFN4Q6PJG9 635 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 CREB3L2Q70SY1 520 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 TMEM251Q8N6I4 163 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 NOXO1Q8NFA2 376 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 C11orf40Q8WZ69 217 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 RGP1Q92546 391 aaPredicted RBP9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 DACH2Q96NX9 599 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 NXF2Q9GZY0 626 aaKnown RBP9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 DEFB127Q9H1M4 99 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 SMURF1Q9HCE7 757 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 HMG20AQ9NP66 347 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 ABCB9Q9NP78 766 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 B3GAT2Q9NPZ5 323 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 CENPMQ9NSP4 180 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 KLK13Q9UKR3 277 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 N6AMT1Q9Y5N5 214 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 SVILO95425 2214 aa9.67□□□□□ -0.86
SNRPA1-211ENST00000560433 EFSO43281 561 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 IL1AP01583 271 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 GFRA1P56159 465 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 CSNK2A1P68400 391 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 GPR50Q13585 617 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 SLC25A25Q6KCM7 469 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 PRSS35Q8N3Z0 413 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 PARP16Q8N5Y8 322 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 ABHD3Q8WU67 409 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 BORCS5Q969J3 196 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 B3GNT4Q9C0J1 378 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 RNF32Q9H0A6 362 aa9.66□□□□□ -0.86
SNRPA1-211ENST00000560433 SLC25A18Q9H1K4 315 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms