RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ADAMTS16Q8TE57 1224 aa11.83□□□□□ -0.52
SMAD3-214ENST00000560402 FBLIM1Q8WUP2 373 aa11.83□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF385AQ96PM9 386 aaKnown RBP11.83□□□□□ -0.52
SMAD3-214ENST00000560402 SLC38A2Q96QD8 506 aa11.83□□□□□ -0.52
SMAD3-214ENST00000560402 C1QTNF6Q9BXI9 259 aa11.83□□□□□ -0.52
SMAD3-214ENST00000560402 TESQ9UGI8 421 aaKnown RBP11.83□□□□□ -0.52
SMAD3-214ENST00000560402 A4GNTQ9UNA3 340 aa11.83□□□□□ -0.52
SMAD3-214ENST00000560402 RASD1Q9Y272 281 aa11.83□□□□□ -0.52
SMAD3-214ENST00000560402 TRBV4-1A0A0J9YWV2 114 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 SH3PXD2BA1X283 911 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 AHSA1O95433 338 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 F12P00748 615 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-214ENST00000560402 OSMP13725 252 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 HOXB1P14653 301 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-214ENST00000560402 USF1P22415 310 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-214ENST00000560402 GZMKP49863 264 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 PDLIM4P50479 330 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 P2RY4P51582 365 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 CDH15P55291 814 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 UBE2NP61088 152 aaKnown RBP11.82□□□□□ -0.52
SMAD3-214ENST00000560402 CDK5R2Q13319 367 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 SWI5Q1ZZU3 235 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 TBRG1Q3YBR2 411 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 C1orf140Q5VVS0 124 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 CYB5R2Q6BCY4 276 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 C5orf46Q6UWT4 87 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF730Q6ZMV8 503 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 FAM169BQ8N8A8 192 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 ZIC4Q8N9L1 334 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 BPIFB6Q8NFQ5 453 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 OR1K1Q8NGR3 316 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 GNPDA2Q8TDQ7 276 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 C3orf49Q96BT1 292 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 Q96MT0 163 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 ALKBH3Q96Q83 286 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-214ENST00000560402 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 TSC22D3Q99576 134 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 MCHR1Q99705 422 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 PIMREGQ9BSJ6 248 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 LINC00470Q9BZP3 86 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 CRNNQ9UBG3 495 aaPredicted RBP11.82□□□□□ -0.52
SMAD3-214ENST00000560402 MOKQ9UQ07 419 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 RCE1Q9Y256 329 aa11.82□□□□□ -0.52
SMAD3-214ENST00000560402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.82□□□□□ -0.523e-14■■□□□ 13.5
SMAD3-214ENST00000560402 IGHV1-18A0A0C4DH31 117 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 H3BN98 237 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 FFAR1O14842 300 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 FZD7O75084 574 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 NPIPB7O75200 414 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 CRYAAP02489 173 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 GKN3PP0CG01 181 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 IGHV4-31P0DP07 118 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF16P17020 682 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-214ENST00000560402 GTF2E2P29084 291 aaKnown RBP11.81□□□□□ -0.52
SMAD3-214ENST00000560402 THBS2P35442 1172 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 CRISP1P54107 249 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 LSM11P83369 360 aaKnown RBP eCLIP11.81□□□□□ -0.521e-6■■□□□ 12.1
SMAD3-214ENST00000560402 MVKQ03426 396 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 PIN1Q13526 163 aaPredicted RBP11.81□□□□□ -0.52
SMAD3-214ENST00000560402 ZBED5Q49AG3 693 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 HIKESHIQ53FT3 197 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 CD300LDQ6UXZ3 194 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 KCTD8Q6ZWB6 473 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 CREB3L2Q70SY1 520 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 PHC2Q8IXK0 858 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 OR4K5Q8NGD3 323 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 MFSD8Q8NHS3 518 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 HTRA1Q92743 480 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 MYDGFQ969H8 173 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 NIPSNAP1Q9BPW8 284 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 C12orf10Q9HB07 376 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 TMEM27Q9HBJ8 222 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 CLN6Q9NWW5 311 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 SELENONQ9NZV5 590 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 MALRD1Q5VYJ5 2156 aa11.81□□□□□ -0.52
SMAD3-214ENST00000560402 TRAPPC13A5PLN9 417 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 CPSF4LA6NMK7 179 aaKnown RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 VWC2LB2RUY7 222 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 B9A039 149 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF701M0R085 212 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 RGS10O43665 173 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 AKAP8O43823 692 aaKnown RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 JUNBP17275 347 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 POLR2IP36954 125 aaKnown RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 SELENOPP49908 381 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 PPOXP50336 477 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 EFNB3Q15768 340 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 ENTPD8Q5MY95 495 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 ZNF770Q6IQ21 691 aaPredicted RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 PGBD2Q6P3X8 592 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 NIPAL3Q6P499 406 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 ANKRD16Q6P6B7 361 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 SLC46A3Q7Z3Q1 461 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 RBM45Q8IUH3 476 aaKnown RBP11.8□□□□□ -0.52
SMAD3-214ENST00000560402 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 CDK20Q8IZL9 346 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 OR4F15Q8NGB8 312 aa11.8□□□□□ -0.52
SMAD3-214ENST00000560402 OR4D11Q8NGI4 311 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms