RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CXCR4P61073 352 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 MED21Q13503 144 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 APOFQ13790 326 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 GGTLC2Q14390 218 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 STK11Q15831 433 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 HSPB2Q16082 182 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 KCNMB1Q16558 191 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 PCK2Q16822 640 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 CEACAM16Q2WEN9 425 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 SLC35D3Q5M8T2 416 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 MEDAGQ5VYS4 303 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 TMEM211Q6ICI0 200 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 HDDC2Q7Z4H3 204 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 FJX1Q86VR8 437 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 TIGD4Q8IY51 512 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 CNEP1R1Q8N9A8 125 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 POMGNT2Q8NAT1 580 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 FGFBP3Q8TAT2 258 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 SMAP2Q8WU79 429 aaPredicted RBP8.24□□□□□ -1.09
HERC1-206ENST00000559996 NSMAFQ92636 917 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 HTRA1Q92743 480 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 APH1AQ96BI3 265 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 CCDC120Q96HB5 630 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 PLEKHA8Q96JA3 519 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 SFXN3Q9BWM7 321 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 OPN3Q9H1Y3 402 aaPredicted RBP8.24□□□□□ -1.09
HERC1-206ENST00000559996 OR51V1Q9H2C8 321 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 DUSP21Q9H596 190 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 CRLF2Q9HC73 371 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 IMPAD1Q9NX62 359 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 ZNF224Q9NZL3 707 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 MOKQ9UQ07 419 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 EXOGQ9Y2C4 368 aaKnown RBP8.24□□□□□ -1.09
HERC1-206ENST00000559996 EMC9Q9Y3B6 208 aa8.24□□□□□ -1.09
HERC1-206ENST00000559996 ZNF503-AS2A6NEH8 195 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 OR6C65A6NJZ3 312 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 SLC1A7O00341 560 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 LRRTM2O43300 516 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 AKAP8O43823 692 aaKnown RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 KHDRBS3O75525 346 aaKnown RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 CNOT4O95628 575 aaKnown RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 HTR1AP08908 422 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 DBTP11182 482 aaKnown RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 LAP3P28838 519 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 CRABP1P29762 137 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 OPRM1P35372 400 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 HCCSP53701 268 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 CDH11P55287 796 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 PER3P56645 1201 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ROR2Q01974 943 aaKnown RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 HSF2Q03933 536 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ZNF91Q05481 1191 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 SRSF1Q07955 248 aaKnown RBP eCLIP8.23□□□□□ -1.099e-7■□□□□ 9.8
HERC1-206ENST00000559996 FAPQ12884 760 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 DOC2BQ14184 412 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ENDOGQ14249 297 aaKnown RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 MEP1BQ16820 701 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 KLHL12Q53G59 568 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 Q6ZT83 130 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 C22orf34Q6ZV56 151 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ZNF100Q8IYN0 542 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ZNF433Q8N7K0 673 aaPredicted RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 SLC26A10Q8NG04 563 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 OR6N1Q8NGY5 312 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 OR2T4Q8NH00 348 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 FNDC8Q8TC99 324 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 RND1Q92730 232 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 LGALS12Q96DT0 336 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ZMYND19Q96E35 227 aaPredicted RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 ZNF75AQ96N20 296 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ALKBH3Q96Q83 286 aaPredicted RBP8.23□□□□□ -1.09
HERC1-206ENST00000559996 TEX12Q9BXU0 123 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 PRRG3Q9BZD7 231 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ULBP2Q9BZM5 246 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 WDR76Q9H967 626 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 ADGRL4Q9HBW9 690 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 CLN6Q9NWW5 311 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 PSORS1C1Q9UIG5 152 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 MYRFQ9Y2G1 1151 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 HIVEP3Q5T1R4 2406 aa8.23□□□□□ -1.09
HERC1-206ENST00000559996 A0A1B0GUH1 482 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 TVP23AA6NH52 213 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 ZNF99A8MXY4 864 aaPredicted RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 PRR32B1ATL7 298 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 MSTNO14793 375 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 HRGP04196 525 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 SBK2P0C263 348 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 CCDC159P0C7I6 412 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 COX5AP20674 150 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 PAICSP22234 425 aaKnown RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 MPGP29372 298 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 HIST1H3AP68431 136 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 SLC35A2P78381 396 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 MRPS34P82930 218 aaKnown RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 ARF1P84077 181 aaKnown RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 PIGFQ07326 219 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 TMED1Q13445 227 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 GABRA6Q16445 453 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms