RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 GMNCA6NCL1 334 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 KPNA4O00629 521 aaPredicted RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 WIPF1O43516 503 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 SPRY3O43610 288 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 DEAF1O75398 565 aaPredicted RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 ERLIN1O75477 346 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 FOXH1O75593 365 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 IGHV2-5P01817 119 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 OPN1SWP03999 348 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 ACADSP16219 412 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 FUT1P19526 365 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 STOMP27105 288 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 GUCA1AP43080 201 aaPredicted RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 GDI2P50395 445 aaKnown RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 ATP4BP51164 291 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 DAP3P51398 398 aaKnown RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 MRPS34P82930 218 aaKnown RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 FOXL1Q12952 345 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 PABPC1L2AQ5JQF8 200 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 INTS11Q5TA45 600 aaKnown RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 DLEU7Q6UYE1 221 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 SYT14Q8NB59 555 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 GPR32P1Q8NGA4 272 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 VANGL1Q8TAA9 524 aaPredicted RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 LRRC8CQ8TDW0 803 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 ST7LQ8TDW4 575 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 TLCD1Q96CP7 247 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 ZNF347Q96SE7 839 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 DIRC2Q96SL1 478 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 CPPED1Q9BRF8 314 aaPredicted RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 MRPL13Q9BYD1 178 aaKnown RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 IKZF5Q9H5V7 419 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 TMBIM4Q9HC24 238 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 CGGBP1Q9UFW8 167 aaPredicted RBP7.8□□□□□ -1.16
HDDC3-204ENST00000559834 ZDHHC8Q9ULC8 765 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 NDUFAF1Q9Y375 327 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 WNK2Q9Y3S1 2297 aa7.8□□□□□ -1.16
HDDC3-204ENST00000559834 PPIAL4EA0A075B759 164 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 PPIAL4CA0A0B4J2A2 164 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ISPDA4D126 451 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 PPIAL4DF5H284 164 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ANGPT2O15123 496 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 RRP9O43818 475 aaKnown RBP7.79□□□□□ -1.16
HDDC3-204ENST00000559834 TRMUO75648 421 aaKnown RBP7.79□□□□□ -1.16
HDDC3-204ENST00000559834 PRSS23O95084 383 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 LYPD3O95274 346 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 IGHV1-46P01743 117 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 MT-ND1P03886 318 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 THY1P04216 161 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 F13BP05160 661 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ADH4P08319 380 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 MMP7P09237 267 aaPredicted RBP7.79□□□□□ -1.16
HDDC3-204ENST00000559834 PPIAL4FP0DN26 164 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ADRA2CP18825 462 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ARHGDIAP52565 204 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ZNF133P52736 654 aaPredicted RBP7.79□□□□□ -1.16
HDDC3-204ENST00000559834 UGT2B15P54855 530 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 PCBD1P61457 104 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 GLO1Q04760 184 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 RPL18Q07020 188 aaKnown RBP7.79□□□□□ -1.16
HDDC3-204ENST00000559834 SGCAQ16586 387 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 AWAT1Q58HT5 328 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ZMAT1Q5H9K5 638 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 THEM4Q5T1C6 240 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 C10orf128Q5T292 105 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 MBNL2Q5VZF2 373 aaKnown RBP7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ARL9Q6T311 187 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 SHISA2Q6UWI4 295 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ZER1Q7Z7L7 766 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 PTOV1Q86YD1 416 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 RBM45Q8IUH3 476 aaKnown RBP7.79□□□□□ -1.16
HDDC3-204ENST00000559834 DPP10Q8N608 796 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 NOXO1Q8NFA2 376 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 FNDC8Q8TC99 324 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 TSPEARQ8WU66 669 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 MARS2Q96GW9 593 aaKnown RBP7.79□□□□□ -1.16
HDDC3-204ENST00000559834 POM121L2Q96KW2 1035 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 RBP7Q96R05 134 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 SEPHS2Q99611 448 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 CGREF1Q99674 301 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 GPA33Q99795 319 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 SLC6A7Q99884 636 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 EBF4Q9BQW3 602 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ZNF426Q9BUY5 554 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 PCDHAC1Q9H158 963 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 NANOGQ9H9S0 305 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 SMURF2Q9HAU4 748 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 ELOVL3Q9HB03 270 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 INIPQ9NRY2 104 aa7.79□□□□□ -1.16
HDDC3-204ENST00000559834 C5orf49A4QMS7 147 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 HTR3EA5X5Y0 456 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 H3BSA7 217 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 OR7A10O76100 309 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 UBOX5O94941 541 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 IGF2P01344 180 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 ZNF32P17041 273 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 MAKP20794 623 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 TUBG1P23258 451 aa7.78□□□□□ -1.16
HDDC3-204ENST00000559834 RBM34P42696 430 aaKnown RBP7.78□□□□□ -1.16
HDDC3-204ENST00000559834 MMP15P51511 669 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms