RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZNF83P51522 516 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 EFNB1P98172 346 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 PTGES3Q15185 160 aaKnown RBP9.5□□□□□ -0.89
TPM1-217ENST00000559108 LRRC36Q1X8D7 754 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 ZIK1Q3SY52 487 aaPredicted RBP9.5□□□□□ -0.89
TPM1-217ENST00000559108 TIMM23BQ5SRD1 257 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 THEM4Q5T1C6 240 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 LINC01590Q5TEZ4 76 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 SLX4IPQ5VYV7 408 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 C12orf73Q69YU5 71 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 RPL13AP3Q6NVV1 102 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 ANKRD16Q6P6B7 361 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 ZNF813Q6ZN06 617 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 ZNF771Q7L3S4 317 aaPredicted RBP9.5□□□□□ -0.89
TPM1-217ENST00000559108 BCDIN3DQ7Z5W3 292 aaKnown RBP9.5□□□□□ -0.89
TPM1-217ENST00000559108 ADCK1Q86TW2 530 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 SLC22A24Q8N4F4 322 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 OR51L1Q8NGJ5 315 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 FAM222BQ8WU58 562 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 NEUROG1Q92886 237 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 STMN2Q93045 179 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 UBE2FQ969M7 185 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 FBXO17Q96EF6 278 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 MS4A3Q96HJ5 214 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 HDHD5Q9BXW7 423 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 RERGLQ9H628 205 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 HINT3Q9NQE9 182 aaKnown RBP9.5□□□□□ -0.89
TPM1-217ENST00000559108 MRPL22Q9NWU5 206 aaKnown RBP9.5□□□□□ -0.89
TPM1-217ENST00000559108 B9D1Q9UPM9 204 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 CACNA1DQ01668 2161 aa9.5□□□□□ -0.89
TPM1-217ENST00000559108 HEATR1Q9H583 2144 aaKnown RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 ABCA12Q86UK0 2595 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 IGHV1-18A0A0C4DH31 117 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 A0A1W2PPL8 197 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 A6NNC1 897 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 CASQ2O14958 399 aaPredicted RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 IDH3BO43837 385 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 PRKYO43930 277 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 SNAP29O95721 258 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 WNT11O96014 354 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 MMP7P09237 267 aaPredicted RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 LAP3P28838 519 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 ALDH3A2P51648 485 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 ARHGDIAP52565 204 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 SH3BGRP55822 239 aaPredicted RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 MRPS34P82930 218 aaKnown RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 PIGFQ07326 219 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 DAZAP2Q15038 168 aaPredicted RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 PPA1Q15181 289 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 TRIP10Q15642 601 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 SLC27A4Q6P1M0 643 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 B3GLCTQ6Y288 498 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 ZBTB46Q86UZ6 589 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 MDP1Q86V88 176 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 LRRC18Q8N456 261 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 C17orf78Q8N4C9 275 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 LILRB1Q8NHL6 650 aaPredicted RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 C11orf40Q8WZ69 217 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 NRGNQ92686 78 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 PTP4A1Q93096 173 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 PLPPR2Q96GM1 343 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 SNX18Q96RF0 628 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 RBM4BQ9BQ04 359 aaKnown RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 TOR3AQ9H497 397 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 RIBC2Q9H4K1 309 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 ZNF556Q9HAH1 456 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 SRA1Q9HD15 236 aaKnown RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 B3GAT2Q9NPZ5 323 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 POLE4Q9NR33 117 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 CMC2Q9NRP2 79 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 STX18Q9P2W9 335 aaKnown RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 CRNNQ9UBG3 495 aaPredicted RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 AASSQ9UDR5 926 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 KCNN3Q9UGI6 736 aa9.49□□□□□ -0.89
TPM1-217ENST00000559108 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
TPM1-217ENST00000559108 CCDC182A6NF36 153 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 TVP23AA6NH52 213 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 XKRYO14609 159 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 CTAG2O75638 210 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 IGLV1-44P01699 117 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 PPP3CBP16298 524 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 ZNF32P17041 273 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 SPI1P17947 270 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 SLC2A5P22732 501 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 ANOS1P23352 680 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 RPS27P42677 84 aaKnown RBP9.48□□□□□ -0.89
TPM1-217ENST00000559108 BSPH1Q075Z2 132 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 NPRL3Q12980 569 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 SGCAQ16586 387 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 NCMAPQ5T1S8 102 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 OGFRL1Q5TC84 451 aaPredicted RBP9.48□□□□□ -0.89
TPM1-217ENST00000559108 FAM27BQ5VT28 67 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 OR7E24Q6IFN5 339 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 PLBD1Q6P4A8 553 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 HDDC2Q7Z4H3 204 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 ABHD12BQ7Z5M8 362 aaPredicted RBP9.48□□□□□ -0.89
TPM1-217ENST00000559108 JAZF1Q86VZ6 243 aa9.48□□□□□ -0.89
TPM1-217ENST00000559108 PAQR4Q8N4S7 273 aaPredicted RBP9.48□□□□□ -0.89
TPM1-217ENST00000559108 SLC26A10Q8NG04 563 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms