RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 PTDSS1P48651 473 aaKnown RBP16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 CDH11P55287 796 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 SPOCK1Q08629 439 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 SLC36A2Q495M3 483 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 ZFP1Q6P2D0 407 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 DNM1P34Q6PK57 102 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 SLC22A25Q6T423 547 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 SKA3Q8IX90 412 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 HS3ST5Q8IZT8 346 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 OR8D4Q8NGM9 314 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 OR5K1Q8NHB7 308 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 DNAJC9Q8WXX5 260 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 AKAP1Q92667 903 aaKnown RBP eCLIP16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 HTRA1Q92743 480 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 FBXW5Q969U6 566 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 SNX18Q96RF0 628 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 SH3GL3Q99963 347 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 SIAEQ9HAT2 523 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 POU2F3Q9UKI9 436 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 MYO9AB2RTY4 2548 aa16.44■□□□□ 0.22
RABGGTA-208ENST00000558954 RTTNQ86VV8 2226 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 ARID1AO14497 2285 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 SHISA9B4DS77 424 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 H3BN98 237 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 RENP00797 406 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 CRYAAP02489 173 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 CECR9P0C854 216 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 HIST1H1CP16403 213 aaKnown RBP16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 CTLA4P16410 223 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 GIPRP48546 466 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 PIGFQ07326 219 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 KEAP1Q14145 624 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 ZNF672Q499Z4 452 aaPredicted RBP16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 LEG1Q6P5S2 330 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 FOXL2NBQ6ZUU3 175 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 SLC16A14Q7RTX9 510 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 HIPK1Q86Z02 1210 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 LNX2Q8N448 690 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 ATG16L2Q8NAA4 619 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 OR2T33Q8NG76 320 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 OR4K13Q8NH42 304 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 PYDC1Q8WXC3 89 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 NINJ1Q92982 152 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 NABP1Q96AH0 204 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 TSSK6Q9BXA6 273 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 KCNN2Q9H2S1 579 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 LIME1Q9H400 295 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 SEC61A2Q9H9S3 476 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 CSMD2Q7Z408 3487 aa16.43■□□□□ 0.22
RABGGTA-208ENST00000558954 ATP6V1G2-DDX39BF2Z307 99 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 SLC16A7O60669 478 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 TP53P04637 393 aaPredicted RBP16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 ZNF23P17027 643 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 MSR1P21757 451 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 CRABP1P29762 137 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 CDKN2AP42771 156 aaKnown RBP16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 RAB1AP62820 205 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 NAAAQ02083 359 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 SGCAQ16586 387 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 SLC36A3Q495N2 470 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 FAM27BQ5VT28 67 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 TMEM53Q6P2H8 277 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 SVOPLQ8N434 492 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 LRRC18Q8N456 261 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 LRTOMTQ8WZ04 291 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 NMNAT3Q96T66 252 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 RERGLQ9H628 205 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 NOX3Q9HBY0 568 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 REV1Q9UBZ9 1251 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 PLEKHA6Q9Y2H5 1048 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 CREBBPQ92793 2442 aa16.42■□□□□ 0.22
RABGGTA-208ENST00000558954 G3V2T6 193 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 KHDRBS3O75525 346 aaKnown RBP16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 CELA3BP08861 270 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 ZNF14P17017 642 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 PRKACGP22612 351 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 DNASE1P24855 282 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 ZSCAN26Q16670 478 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 SLC35F1Q5T1Q4 408 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 AMIGO2Q86SJ2 522 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 MYPOPQ86VE0 399 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 ZDHHC13Q8IUH4 622 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 ZNF611Q8N823 705 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 SDR9C7Q8NEX9 313 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 IL17RDQ8NFM7 739 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 OR52E2Q8NGJ4 325 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 LILRB1Q8NHL6 650 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 CENPNQ96H22 339 aaPredicted RBP16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 NUAK2Q9H093 628 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 RNF121Q9H920 327 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 CCNB1IP1Q9NPC3 277 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 POLE4Q9NR33 117 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 FAIMQ9NVQ4 179 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 MOKQ9UQ07 419 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 ARFGEF3Q5TH69 2177 aa16.41■□□□□ 0.22
RABGGTA-208ENST00000558954 ATE1O95260 518 aa16.4■□□□□ 0.22
RABGGTA-208ENST00000558954 IGFBP1P08833 259 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-208ENST00000558954 OSMP13725 252 aa16.4■□□□□ 0.22
RABGGTA-208ENST00000558954 LAP3P28838 519 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms