RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 MAS1LP35410 378 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SERPINB5P36952 375 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 NBL1P41271 181 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SLC1A1P43005 524 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 TNNT2P45379 298 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 RAB9AP51151 201 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SSR4P51571 173 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 CCR6P51684 374 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 CCR8P51685 355 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SH3BGRP55822 239 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 CLDN8P56748 225 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 EIF3EP60228 445 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 NUTF2P61970 127 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 RPS15AP62244 130 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 RPS21P63220 83 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 MXD1Q05195 221 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 ORC2Q13416 577 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 IL18Q14116 193 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 PON3Q15166 354 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 ZNF726P1Q15940 193 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 HADHQ16836 314 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 RFX4Q33E94 735 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 PIGGQ5H8A4 983 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 OTPQ5XKR4 325 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 TTC19Q6DKK2 380 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 FRMPD2BQ6IN97 320 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 DNAJC24Q6P3W2 148 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 ZNF621Q6ZSS3 439 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 COX15Q7KZN9 410 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 STPG2Q8N412 459 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 LIX1Q8N485 282 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 COMMD1Q8N668 190 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 LRRC75AQ8NAA5 344 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 OR4C5Q8NGB2 326 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 OR56A4Q8NGH8 313 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 OR10R2Q8NGX6 335 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 LYPD6BQ8NI32 183 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 DTX3LQ8TDB6 740 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 STMN2Q93045 179 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 PHYHIPLQ96FC7 376 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 DYNLL2Q96FJ2 89 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 RNF185Q96GF1 192 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SERPINB12Q96P63 405 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 UCK2Q9BZX2 261 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 ACTR3CQ9C0K3 210 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 ELOVL6Q9H5J4 265 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 C8orf33Q9H7E9 229 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 CYP3A43Q9HB55 503 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 ACP6Q9NPH0 428 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 C20orf96Q9NUD7 363 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 EXD2Q9NVH0 621 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 HRASLS2Q9NWW9 162 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 LYARQ9NX58 379 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 SLC25A37Q9NYZ2 338 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 STOX2Q9P2F5 926 aaPredicted RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 MYEF2Q9P2K5 600 aaKnown RBP1.11□□□□□ -2.23
USP3-209ENST00000558925 ZNF225Q9UK10 706 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 SLC17A4Q9Y2C5 497 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 LTBP1Q14766 1721 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 FANCIQ9NVI1 1328 aa1.11□□□□□ -2.23
USP3-209ENST00000558925 CAMTA1Q9Y6Y1 1673 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 ARPC4-TTLL3A0A0A6YYG9 625 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 PLAC8L1A1L4L8 177 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 A6NDX4 124 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 C11orf94C9JXX5 98 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 H0YC42 278 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 BOLA2-SMG1P6H3BVE0 249 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 SCAMP2O15127 329 aaKnown RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 KMOO15229 486 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 MRPS12O15235 138 aaKnown RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 NUPL2O15504 423 aaKnown RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 HUS1O60921 280 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 ICOSLGO75144 302 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 FKBP6O75344 327 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 CLDN11O75508 207 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 FCN3O75636 299 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 BBOX1O75936 387 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 FLOT1O75955 427 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 SRP72O76094 671 aaKnown RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 CCNB2O95067 398 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 CD160O95971 181 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 IGLV1-47P01700 117 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 IFNW1P05000 195 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 IGHV4-34P06331 123 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 SERPINE2P07093 398 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 GNAO1P09471 354 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 POLR2MP0CAP2 368 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 UBCP0CG48 685 aaKnown RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 MYL2P10916 166 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 RALBP11234 206 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 TDGF1P13385 188 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 CCNB1P14635 433 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 CTRB1P17538 263 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 CSNK2A2P19784 350 aaPredicted RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 AK4P27144 223 aaPredicted RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 HMOX2P30519 316 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 NUDT1P36639 197 aa1.1□□□□□ -2.23
USP3-209ENST00000558925 GPX4P36969 197 aaPredicted RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 CCT6AP40227 531 aaKnown RBP1.1□□□□□ -2.23
USP3-209ENST00000558925 RPS10P46783 165 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms