RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 GSTM3P21266 225 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 SH3BGRP55822 239 aaPredicted RBP13.53□□□□□ -0.24
LINC01220-201ENST00000558575 TUBA1BP68363 451 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 TUBA4AP68366 448 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 PPA1Q15181 289 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 CLEC12AQ5QGZ9 265 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 FAM205BPQ63HN1 556 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 ZFP1Q6P2D0 407 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 TUBA1AQ71U36 451 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 HDDC2Q7Z4H3 204 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 C17orf78Q8N4C9 275 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 FGFBP3Q8TAT2 258 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 Q96MF0 132 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 ZNF570Q96NI8 536 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 HS3ST6Q96QI5 342 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 IFT27Q9BW83 186 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 TSSK6Q9BXA6 273 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 C1QTNF6Q9BXI9 259 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 ZNF226Q9NYT6 803 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 ZNF224Q9NZL3 707 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 STX18Q9P2W9 335 aaKnown RBP13.53□□□□□ -0.24
LINC01220-201ENST00000558575 POFUT2Q9Y2G5 429 aa13.53□□□□□ -0.24
LINC01220-201ENST00000558575 CR1P17927 2039 aa13.52□□□□□ -0.24
LINC01220-201ENST00000558575 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.52□□□□□ -0.25
LINC01220-201ENST00000558575 DPRXA6NFQ7 191 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 TRIM64A6NGJ6 449 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 TRIM64BA6NI03 449 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 G3V2T6 193 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 HIST1H1CP16403 213 aaKnown RBP13.52□□□□□ -0.25
LINC01220-201ENST00000558575 RPS6KA3P51812 740 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 CD47Q08722 323 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 KRR1Q13601 381 aaKnown RBP13.52□□□□□ -0.25
LINC01220-201ENST00000558575 ETFDHQ16134 617 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 SLC36A3Q495N2 470 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 THEM4Q5T1C6 240 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 FBXW10Q5XX13 1052 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 KLHL24Q6TFL4 600 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 ZNF813Q6ZN06 617 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 OR4K13Q8NH42 304 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 MUCL1Q96DR8 90 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 RBP7Q96R05 134 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 FOXB1Q99853 325 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 SMURF2Q9HAU4 748 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 TMEM38BQ9NVV0 291 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.25
LINC01220-201ENST00000558575 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.25
LINC01220-201ENST00000558575 RAI1Q7Z5J4 1906 aaPredicted RBP13.52□□□□□ -0.25
LINC01220-201ENST00000558575 ARPC4-TTLL3A0A0A6YYG9 625 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 ERICH4A6NGS2 130 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 DCTN6O00399 190 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 WIPF1O43516 503 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 IDH3BO43837 385 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 AHCYL1O43865 530 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 MITFO75030 526 aaPredicted RBP13.51□□□□□ -0.25
LINC01220-201ENST00000558575 SCG5P05408 212 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 HOXB1P14653 301 aaPredicted RBP13.51□□□□□ -0.25
LINC01220-201ENST00000558575 B4GALT1P15291 398 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 CTLA4P16410 223 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 CDAP32320 146 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 SLC35F1Q5T1Q4 408 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 RPL13AP3Q6NVV1 102 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 HIPK1Q86Z02 1210 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 SKA3Q8IX90 412 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 LNX2Q8N448 690 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 NSMAFQ92636 917 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 NMNAT3Q96T66 252 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 NDEL1Q9GZM8 345 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 GABARAPL1Q9H0R8 117 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 SYT4Q9H2B2 425 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 NOX3Q9HBY0 568 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 TMEFF2Q9UIK5 374 aaPredicted RBP13.51□□□□□ -0.25
LINC01220-201ENST00000558575 AMDHD2Q9Y303 409 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 ABCA1O95477 2261 aa13.51□□□□□ -0.25
LINC01220-201ENST00000558575 ANK2Q01484 3957 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 OR6C68A6NDL8 312 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 XKRYO14609 159 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 PLAUP00749 431 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 HLA-HP01893 362 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 PATE4P0C8F1 98 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 OSMP13725 252 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 ZNF23P17027 643 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 GIPRP48546 466 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 ZNF83P51522 516 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 ARHGDIAP52565 204 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 BEX5Q5H9J7 111 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 NCMAPQ5T1S8 102 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 KDM4DQ6B0I6 523 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 ACSM5Q6NUN0 579 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 FOXL2NBQ6ZUU3 175 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 ZDHHC13Q8IUH4 622 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 C10orf67Q8IYJ2 551 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 SLC22A24Q8N4F4 322 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 IQCF1Q8N6M8 205 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 ATG16L2Q8NAA4 619 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 NPEPL1Q8NDH3 523 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 OR52E2Q8NGJ4 325 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 NABP1Q96AH0 204 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 PIK3IP1Q96FE7 263 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 PLPPR2Q96GM1 343 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 ZNF75AQ96N20 296 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms