RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 AP2S1P53680 142 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 P2RX3P56373 397 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 PUDPQ08623 228 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 SNTA1Q13424 505 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 TRA2AQ13595 282 aaKnown RBP eCLIP7.49□□□□□ -1.21
SPG11-209ENST00000558253 PCK2Q16822 640 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 SWI5Q1ZZU3 235 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 COL28A1Q2UY09 1125 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 SAMD5Q5TGI4 173 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 LYSMD4Q5XG99 296 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 GLT8D1Q68CQ7 371 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 LYPD4Q6UWN0 246 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 IL20RBQ6UXL0 311 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 COX15Q7KZN9 410 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 FCRLAQ7L513 359 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 DPY19L4Q7Z388 723 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 CPEB2Q7Z5Q1 589 aaKnown RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 PM20D2Q8IYS1 436 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 UBE2J2Q8N2K1 259 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 ZNF433Q8N7K0 673 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 OR13C5Q8NGS8 318 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 ZPLD1Q8TCW7 415 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 SMAP2Q8WU79 429 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 SLC25A43Q8WUT9 341 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 RGP1Q92546 391 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 HGDQ93099 445 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 PHF21AQ96BD5 680 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 SLC25A36Q96CQ1 311 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 ZNF587Q96SQ5 575 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 SYT4Q9H2B2 425 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 ELOVL3Q9HB03 270 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 GPN1Q9HCN4 374 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 NUDT15Q9NV35 164 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 PAQR5Q9NXK6 330 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 ALKBH4Q9NXW9 302 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 NUP50Q9UKX7 468 aa7.49□□□□□ -1.21
SPG11-209ENST00000558253 ATXN7L1Q9ULK2 861 aaPredicted RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 MRPS7Q9Y2R9 242 aaKnown RBP7.49□□□□□ -1.21
SPG11-209ENST00000558253 LAMA2P24043 3122 aaKnown RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 COL5A1P20908 1838 aaPredicted RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 A0A087WZY1 265 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 LOC100289279A0A1B0GTE1 492 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 A0A1B0GUH1 482 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 LOC102725191A0A1B0GVB3 256 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 ANKRD20A5PA0PJZ0 165 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 ACOD1A6NK06 481 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 A8MU76 341 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 FAM171A2A8MVW0 826 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SNRPGP15A8MWD9 76 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 IDSB3KWA1 339 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 NPIPA5E9PKD4 350 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 TP53I11O14683 189 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 KHNYNO15037 678 aaKnown RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 BET1O15155 118 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SHOXO15266 292 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 LANCL1O43813 399 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SCRG1O75711 98 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 RBBP9O75884 186 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SCGNO76038 276 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 GLSO94925 669 aaPredicted RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 IL5P05113 134 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 UBCP0CG48 685 aaKnown RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 TFPIP10646 304 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 BCKDHBP21953 392 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 ACHEP22303 614 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 PRKACBP22694 351 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 GIFP27352 417 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 CCKBRP32239 447 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 BTCP35070 178 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 PTGS2P35354 604 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 PTH2RP49190 550 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 AGFG1P52594 562 aaKnown RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 NKX2-5P52952 324 aaPredicted RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 DGCR2P98153 550 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 TAGLNQ01995 201 aaKnown RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 SHBQ15464 509 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 FAM189A2Q15884 450 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 RAB11BQ15907 218 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 ZNF239Q16600 458 aaKnown RBP7.48□□□□□ -1.21
SPG11-209ENST00000558253 GSG1Q2KHT4 349 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 GXYLT1Q4G148 440 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 HES5Q5TA89 166 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 C1orf189Q5VU69 101 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 TMEM244Q5VVB8 128 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 ANKRD16Q6P6B7 361 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 TMEM81Q6P7N7 255 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 TMEM205Q6UW68 189 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 KANSL1Q7Z3B3 1105 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 KRT77Q7Z794 578 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 WDR5BQ86VZ2 330 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 PPP1R3BQ86XI6 285 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 PRR22Q8IZ63 422 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 NKAIN3Q8N8D7 197 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 APCDD1LQ8NCL9 501 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 OR52N5Q8NH56 324 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SYNPRQ8TBG9 265 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 TMEM106AQ96A25 262 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 C8orf44Q96CB5 159 aa7.48□□□□□ -1.21
SPG11-209ENST00000558253 SLC25A38Q96DW6 304 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms