RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 FLNCQ14315 2725 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 NPIPB13A6NJU9 1138 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 NPIPB4C9JG80 1138 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 PRSS44E7EML9 344 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 BHLHE40O14503 412 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 ARPC3O15145 178 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 SHOXO15266 292 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 MGRN1O60291 552 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 RAD51DO75771 328 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 SLC2A10O95528 541 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 ALPLP05186 524 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 QDPRP09417 244 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 CDKN2AP42771 156 aaKnown RBP10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 ALDH3A2P51648 485 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 FMODQ06828 376 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 DBPQ10586 325 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 CEACAM16Q2WEN9 425 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 PGGHGQ32M88 737 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 ANKRD39Q53RE8 183 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 FAM205BPQ63HN1 556 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 ACSM5Q6NUN0 579 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 SLC27A4Q6P1M0 643 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 LEG1Q6P5S2 330 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 PTCHD4Q6ZW05 846 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 ABHD12BQ7Z5M8 362 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 GABRG1Q8N1C3 465 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 SDR9C7Q8NEX9 313 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 NSMAFQ92636 917 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 TMEM54Q969K7 222 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 MCHR2Q969V1 340 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 OTULINQ96BN8 352 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 LRR1Q96L50 414 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 NMNAT3Q96T66 252 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 MRPL13Q9BYD1 178 aaKnown RBP10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 LINC00470Q9BZP3 86 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 ELOVL5Q9NYP7 299 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 USE1Q9NZ43 259 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 MALT1Q9UDY8 824 aa10.56□□□□□ -0.72
HMGB1P8-201ENST00000558211 PRSS37A4D1T9 235 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 C16orf97H3BN30 126 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 C19orf84I3L1E1 186 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 IDH3BO43837 385 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 SEC14L2O76054 403 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 CNOT4O95628 575 aaKnown RBP10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 ATP6V1G2O95670 118 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 TXNDC12O95881 172 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 RENP00797 406 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 ITGA5P08648 1049 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 APEHP13798 732 aaKnown RBP10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 IL32P24001 234 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 EPHA2P29317 976 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 MPGP29372 298 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 CENPAP49450 140 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 RAD23AP54725 363 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 ESRRGP62508 458 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 ARF1P84077 181 aaKnown RBP10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 CDK5Q00535 292 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 TFF3Q07654 80 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 NPRL3Q12980 569 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 ITGADQ13349 1161 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 PTGES3Q15185 160 aaKnown RBP10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 STK11Q15831 433 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 STAC2Q6ZMT1 411 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 BHLHA15Q7RTS1 189 aaPredicted RBP10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 PARP8Q8N3A8 854 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 LNX2Q8N448 690 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 ZNF433Q8N7K0 673 aaPredicted RBP10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 CYB561A3Q8NBI2 242 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 KISS1RQ969F8 398 aaPredicted RBP10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 FOXN4Q96NZ1 517 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 ALG12Q9BV10 488 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 SYT4Q9H2B2 425 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 FN3KQ9H479 309 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 TVP23BQ9NYZ1 205 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 BAIAP2Q9UQB8 552 aa10.55□□□□□ -0.72
HMGB1P8-201ENST00000558211 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 IGKV1D-43A0A0B4J1Z2 117 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 A0A1W2PR80 420 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 SLC22A23A1A5C7 686 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 DHHO43323 396 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 SLC16A7O60669 478 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 SNAP29O95721 258 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 CLDN1O95832 211 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 IFNGP01579 166 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 RNASE1P07998 156 aaKnown RBP10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 GRK5P34947 590 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 UGT2B10P36537 528 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 P2RY6Q15077 328 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 ETFDHQ16134 617 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 FBXL19-AS1Q494R0 122 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 THEM4Q5T1C6 240 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 ADCK1Q86TW2 530 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 SLC37A3Q8NCC5 494 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 LINC01560Q8TB33 94 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 HTRA1Q92743 480 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 ZC3HAV1LQ96H79 300 aaKnown RBP10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 PLEKHA8Q96JA3 519 aa10.54□□□□□ -0.72
HMGB1P8-201ENST00000558211 TSSK2Q96PF2 358 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms