RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TMIGD2Q96BF3 282 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 KRT12Q99456 494 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 GPA33Q99795 319 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 TSG101Q99816 390 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 SYT11Q9BT88 431 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 PRRG4Q9BZD6 226 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 DRC3Q9H069 523 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 CBLN4Q9NTU7 201 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 ADAM22Q9P0K1 906 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 SLC6A5Q9Y345 797 aa4.66□□□□□ -1.66
RTF1-204ENST00000558117 WNK2Q9Y3S1 2297 aa4.65□□□□□ -1.66
RTF1-204ENST00000558117 NINQ8N4C6 2090 aa4.65□□□□□ -1.66
RTF1-204ENST00000558117 LOC105371242A0A075B767 164 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 TRBV11-1A0A0K0K1C0 115 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 LOC390937A0A1W2PQ73 354 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 SNURFLB1AK76 121 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 GOLGA8MH3BSY2 632 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 SLC28A1O00337 649 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 RAMP1O60894 148 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 NXPH2O95156 264 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 P04436 131 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 CRHP06850 196 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 EPB41P11171 864 aaKnown RBP4.65□□□□□ -1.67
RTF1-204ENST00000558117 SELEP16581 610 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 DRD5P21918 477 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 CDH5P33151 784 aaPredicted RBP4.65□□□□□ -1.67
RTF1-204ENST00000558117 OPRL1P41146 370 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 KLK7P49862 253 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 PAX9P55771 341 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 CLDN15P56746 228 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 SLC34A1Q06495 639 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 GABPB1Q06547 395 aaPredicted RBP4.65□□□□□ -1.67
RTF1-204ENST00000558117 FAM53BQ14153 422 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 GK2Q14410 553 aaPredicted RBP4.65□□□□□ -1.67
RTF1-204ENST00000558117 NPTX1Q15818 432 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 KCTD21Q4G0X4 260 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 STAC2Q6ZMT1 411 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 ZNF440Q8IYI8 595 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 RCOR2Q8IZ40 523 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 C2orf73Q8N5S3 287 aaPredicted RBP4.65□□□□□ -1.67
RTF1-204ENST00000558117 CSNK1A1LQ8N752 337 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 FADS6Q8N9I5 356 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 OR9A4Q8NGU2 314 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 JOSD2Q8TAC2 188 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 ZNF671Q8TAW3 534 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 ASZ1Q8WWH4 475 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 ZNF486Q96H40 463 aaPredicted RBP4.65□□□□□ -1.67
RTF1-204ENST00000558117 ZBTB18Q99592 522 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 WWTR1Q9GZV5 400 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 SIRPDQ9H106 197 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 PROK2Q9HC23 129 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 MOKQ9UQ07 419 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 PPP1R3CQ9UQK1 317 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 MRPS7Q9Y2R9 242 aaKnown RBP4.65□□□□□ -1.67
RTF1-204ENST00000558117 EXPH5Q8NEV8 1989 aa4.65□□□□□ -1.67
RTF1-204ENST00000558117 MUC4Q99102 2169 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 DYNC1H1Q14204 4646 aaKnown RBP4.64□□□□□ -1.67
RTF1-204ENST00000558117 A0A1W2PR80 420 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 TMEM129A0AVI4 362 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 DPRXA6NFQ7 191 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 SHISA9B4DS77 424 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 B4DSR2 109 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CCL24O00175 119 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CETN3O15182 167 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 ERLIN1O75477 346 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CALCBP10092 127 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 SLC2A2P11168 524 aaPredicted RBP4.64□□□□□ -1.67
RTF1-204ENST00000558117 CPN1P15169 458 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CYP11B1P15538 503 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 PRDX6P30041 224 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 PRLHRP49683 370 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CSNK2BP67870 215 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 PLOD1Q02809 727 aaPredicted RBP4.64□□□□□ -1.67
RTF1-204ENST00000558117 RASGEF1BQ0VAM2 473 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 SLC36A3Q495N2 470 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 GPR33Q49SQ1 333 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 OLFML2AQ68BL7 652 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 OR4A47Q6IF82 309 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 TAS2R42Q7RTR8 314 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 PRSS41Q7RTY9 318 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 APTXQ7Z2E3 356 aaKnown RBP4.64□□□□□ -1.67
RTF1-204ENST00000558117 ZDHHC21Q8IVQ6 265 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 SIGLECL1Q8N7X8 197 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CNEP1R1Q8N9A8 125 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 OR5K2Q8NHB8 316 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 C4orf45Q96LM5 186 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CSPG4P5Q96PW8 444 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CCT7Q99832 543 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CCDC77Q9BR77 488 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 DGCR6LQ9BY27 220 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 RAB9BQ9NP90 201 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 GPR173Q9NS66 373 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 FARSBQ9NSD9 589 aaKnown RBP4.64□□□□□ -1.67
RTF1-204ENST00000558117 SMOXQ9NWM0 555 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 NDUFA13Q9P0J0 144 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 CHRNA9Q9UGM1 479 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 ATP6V1HQ9UI12 483 aa4.64□□□□□ -1.67
RTF1-204ENST00000558117 RPUSD1Q9UJJ7 312 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms