RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ERMAPQ96PL5 475 aaPredicted RBP7.88□□□□□ -1.15
CHD8-214ENST00000557727 SNX18Q96RF0 628 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 SLC29A1Q99808 456 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 CIB1Q99828 191 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 TSSK6Q9BXA6 273 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 HDHD5Q9BXW7 423 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 ULBP2Q9BZM5 246 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 NMNAT2Q9BZQ4 307 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 NOX3Q9HBY0 568 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 SLC17A5Q9NRA2 495 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 UPB1Q9UBR1 384 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 KCNN3Q9UGI6 736 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 DSCAMO60469 2012 aa7.88□□□□□ -1.15
CHD8-214ENST00000557727 ARFGEF3Q5TH69 2177 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 ARPC4-TTLL3A0A0A6YYG9 625 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 IGLV1-36A0A0B4J1U3 117 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 A0A1W2PR80 420 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 OR6C68A6NDL8 312 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 TUBAL3A6NHL2 446 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 A6NIZ1 184 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 ARHGEF9O43307 516 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 DHHO43323 396 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 IDH3BO43837 385 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 AHCYL1O43865 530 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 ANPEPP15144 967 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 PPP3CBP16298 524 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 NOS3P29474 1203 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 POLR2IP36954 125 aaKnown RBP7.87□□□□□ -1.15
CHD8-214ENST00000557727 PEX19P40855 299 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 KIR2DL3P43628 341 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 GIPRP48546 466 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 RPS6KA3P51812 740 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 SH3BGRP55822 239 aaPredicted RBP7.87□□□□□ -1.15
CHD8-214ENST00000557727 CLRN1P58418 232 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 RAP1BP61224 184 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 RAP1AP62834 184 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 EFNB1P98172 346 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 RCN1Q15293 331 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 PGGHGQ32M88 737 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 TIMM23BQ5SRD1 257 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 ANKRD16Q6P6B7 361 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 HDDC2Q7Z4H3 204 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 ADCK1Q86TW2 530 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 MYPOPQ86VE0 399 aaPredicted RBP7.87□□□□□ -1.15
CHD8-214ENST00000557727 P2RY8Q86VZ1 359 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 C10orf67Q8IYJ2 551 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 C17orf78Q8N4C9 275 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 ATG16L2Q8NAA4 619 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 ICA1LQ8NDH6 482 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 OR6N1Q8NGY5 312 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 OR4K13Q8NH42 304 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 FGFBP3Q8TAT2 258 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 FAM222BQ8WU58 562 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 DNAJC9Q8WXX5 260 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 STMN2Q93045 179 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 TSSK2Q96PF2 358 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 NMNAT3Q96T66 252 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 FOXB1Q99853 325 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 IFT27Q9BW83 186 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 RBM4Q9BWF3 364 aaKnown RBP7.87□□□□□ -1.15
CHD8-214ENST00000557727 HCAR1Q9BXC0 346 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 GABARAPL3Q9BY60 117 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 SYT4Q9H2B2 425 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 SLC25A19Q9HC21 320 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 PAPOLBQ9NRJ5 636 aaKnown RBP7.87□□□□□ -1.15
CHD8-214ENST00000557727 TBC1D23Q9NUY8 699 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 TMEM38BQ9NVV0 291 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 B3GNT2Q9NY97 397 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 USE1Q9NZ43 259 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 STX18Q9P2W9 335 aaKnown RBP7.87□□□□□ -1.15
CHD8-214ENST00000557727 GRHPRQ9UBQ7 328 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 NKX1-2Q9UD57 310 aaPredicted RBP7.87□□□□□ -1.15
CHD8-214ENST00000557727 POFUT2Q9Y2G5 429 aa7.87□□□□□ -1.15
CHD8-214ENST00000557727 CCDC168Q8NDH2 2452 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 A0A096LPE4 126 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 A0A1W2PPZ6 126 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 ZAR1LA6NP61 321 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 H0YHG0 523 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 EI24O14681 340 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 MMP7P09237 267 aaPredicted RBP7.86□□□□□ -1.15
CHD8-214ENST00000557727 GAAP10253 952 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 PSKH1P11801 424 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 B4GALT1P15291 398 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 CDH2P19022 906 aaPredicted RBP7.86□□□□□ -1.15
CHD8-214ENST00000557727 IL32P24001 234 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 CDAP32320 146 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 GRK5P34947 590 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 CRISP1P54107 249 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 TUBA1BP68363 451 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 TUBA4AP68366 448 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 MRPS34P82930 218 aaKnown RBP7.86□□□□□ -1.15
CHD8-214ENST00000557727 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.86□□□□□ -1.15
CHD8-214ENST00000557727 GINS1Q14691 196 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 NRN1LQ496H8 165 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 THEM4Q5T1C6 240 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 SLC35F1Q5T1Q4 408 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 TMEM236Q5W0B7 351 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 OR7E24Q6IFN5 339 aa7.86□□□□□ -1.15
CHD8-214ENST00000557727 KLHL24Q6TFL4 600 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms