RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SYNGR4O95473 234 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 YES1P07947 543 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 H2AFZP0C0S5 128 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 ACADSP16219 412 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 CPN2P22792 545 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 IMPA1P29218 277 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 IL2RGP31785 369 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 CASP3P42574 277 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 RAD52P43351 418 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 NPY2RP49146 381 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 TMED10P49755 219 aaKnown RBP3.06□□□□□ -1.92
CHD8-212ENST00000557329 ZNF83P51522 516 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 RAB38P57729 211 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 DSCR10P59022 87 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 RELAQ04206 551 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 ACSM1Q08AH1 577 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 SERTAD2Q14140 314 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 RYR3Q15413 4870 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 DEFB121Q5J5C9 76 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 TRIM40Q6P9F5 258 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 AGTRAPQ6RW13 159 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 CES3Q6UWW8 571 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 Q6ZRP5 223 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 DNM1P46Q6ZS02 220 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 H2AFVQ71UI9 128 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 SH2D6Q7Z4S9 175 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 RAI1Q7Z5J4 1906 aaPredicted RBP3.06□□□□□ -1.92
CHD8-212ENST00000557329 CDKL3Q8IVW4 592 aaPredicted RBP3.06□□□□□ -1.92
CHD8-212ENST00000557329 C9orf40Q8IXQ3 194 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 KLHDC8AQ8IYD2 350 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 DND1Q8IYX4 353 aaKnown RBP3.06□□□□□ -1.92
CHD8-212ENST00000557329 PRSS35Q8N3Z0 413 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 PRELID2Q8N945 189 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 ZNF540Q8NDQ6 660 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 TRPV3Q8NET8 790 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 OR4K17Q8NGC6 315 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 OR8K3Q8NH51 312 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 SPPL2AQ8TCT8 520 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 ZNF721Q8TF20 911 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 SPSB1Q96BD6 273 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 SNF8Q96H20 258 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 ZNF486Q96H40 463 aaPredicted RBP3.06□□□□□ -1.92
CHD8-212ENST00000557329 PPP1R2P1Q96PQ5 205 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 QKIQ96PU8 341 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD8-212ENST00000557329 NAP1L3Q99457 506 aaPredicted RBP3.06□□□□□ -1.92
CHD8-212ENST00000557329 BPESC1Q9GZL8 116 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 WNK1Q9H4A3 2382 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 RNF121Q9H920 327 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 LRRC40Q9H9A6 602 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 CHRAC1Q9NRG0 131 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD8-212ENST00000557329 ZNHIT6Q9NWK9 470 aaKnown RBP3.06□□□□□ -1.92
CHD8-212ENST00000557329 PTBP2Q9UKA9 531 aaKnown RBP3.06□□□□□ -1.92
CHD8-212ENST00000557329 IKZF3Q9UKT9 509 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 MAD1L1Q9Y6D9 718 aa3.06□□□□□ -1.92
CHD8-212ENST00000557329 TRRAPQ9Y4A5 3859 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 A0A087X0T9 212 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 LOC100653049A0A140TA62 436 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 LOC390937A0A1W2PQ73 354 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 CIB4A0PJX0 185 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 SNURFLB1AK76 121 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 EPM2AB3EWF7 344 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 C9JVG2 144 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 E7EQL1 145 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 H3BMM5 538 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 SAP18O00422 153 aaKnown RBP3.05□□□□□ -1.92
CHD8-212ENST00000557329 PSMD3O43242 534 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 REM1O75628 298 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 LYZL6O75951 148 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 KRT34O76011 436 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 VAPBO95292 243 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 IGHV3-13P01766 116 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 CRYBA1P05813 215 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 ERCC1P07992 297 aaPredicted RBP3.05□□□□□ -1.92
CHD8-212ENST00000557329 FAM228BP0C875 321 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 ADRA2CP18825 462 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 DEKP35659 375 aaKnown RBP3.05□□□□□ -1.92
CHD8-212ENST00000557329 LHX2P50458 406 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 SUCLG1P53597 346 aaKnown RBP3.05□□□□□ -1.92
CHD8-212ENST00000557329 LIM2P55344 173 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 XGP55808 180 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 UBA52P62987 128 aaKnown RBP3.05□□□□□ -1.92
CHD8-212ENST00000557329 CRADDP78560 199 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 PAX8Q06710 450 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 CDH17Q12864 832 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 BAMBIQ13145 260 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 STX5Q13190 355 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 SLMAPQ14BN4 828 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 PPA1Q15181 289 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 RPS6KA1Q15418 735 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 PARP6Q2NL67 630 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 ZNF311Q5JNZ3 666 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 CTSL3PQ5NE16 218 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 LGSNQ5TDP6 509 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 LEG1Q6P5S2 330 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 CCBE1Q6UXH8 406 aaPredicted RBP3.05□□□□□ -1.92
CHD8-212ENST00000557329 BHLHA15Q7RTS1 189 aaPredicted RBP3.05□□□□□ -1.92
CHD8-212ENST00000557329 SPATA19Q7Z5L4 167 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 LINC00523Q86TU6 105 aa3.05□□□□□ -1.92
CHD8-212ENST00000557329 LRRC6Q86X45 466 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms