RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 M0R233 179 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SAP18O00422 153 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 PLPP1O14494 284 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 LRRTM2O43300 516 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 EEF1E1O43324 174 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF749O43361 778 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 PLPP2O43688 288 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SSNA1O43805 119 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 VEGFDO43915 354 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 REM1O75628 298 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ARL6IP5O75915 188 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TPPPO94811 219 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 FGF19O95750 216 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 WDPCPO95876 746 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ECDO95905 644 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TGM6O95932 706 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 LALBAP00709 142 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 GBAP04062 536 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 HEXAP06865 529 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 CTSLP07711 333 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 CISD3P0C7P0 127 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OR12D1P0DN82 309 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 LAMP2P13473 410 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 LCN1P31025 176 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 BTCP35070 178 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 BSGP35613 385 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TRIM23P36406 574 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OPRD1P41143 372 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OMPP47874 163 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 CLCNKAP51800 687 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 CTSCP53634 463 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 CAV3P56539 151 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 CLDN2P57739 230 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TAS2R38P59533 333 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ACTC1P68032 377 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ACTA1P68133 377 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 NTHL1P78549 312 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 MRPS10P82664 201 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 DHODHQ02127 395 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF155Q12901 538 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 HSPB3Q12988 150 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 EXOSC2Q13868 293 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 FGFBP1Q14512 234 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 KRT33BQ14525 404 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF77Q15935 545 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 MAPK14Q16539 360 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 AANATQ16613 207 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 IZUMO4Q1ZYL8 232 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 GSG1Q2KHT4 349 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF791Q3KP31 576 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 EIPR1Q53HC9 387 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF805Q5CZA5 627 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 EOGTQ5NDL2 527 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ELFN2Q5R3F8 820 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 METTL11BQ5VVY1 283 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 FAM46CQ5VWP2 391 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 FAM109BQ6ICB4 259 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SFXN4Q6P4A7 337 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF620Q6ZNG0 422 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TMEM91Q6ZNR0 172 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ASB18Q6ZVZ8 466 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 PLEKHM3Q6ZWE6 761 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 MBOAT2Q6ZWT7 520 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 KRT74Q7RTS7 529 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 PRSS42Q7Z5A4 293 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ADCK2Q7Z695 626 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 GLRX5Q86SX6 157 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 LHFPL3Q86UP9 236 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 RBM45Q8IUH3 476 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TRAPPC5Q8IUR0 188 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 DCUN1D3Q8IWE4 304 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TIGD4Q8IY51 512 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 RNF113BQ8IZP6 322 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 RAB42Q8N4Z0 105 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SPICQ8N5J4 248 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SAMD12Q8N8I0 201 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 MRPL43Q8N983 215 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 UXS1Q8NBZ7 420 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 FAM71CQ8NEG0 241 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 CADM4Q8NFZ8 388 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OR11H7Q8NGC8 314 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OR52L1Q8NGH7 329 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OR4D11Q8NGI4 311 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OR8D4Q8NGM9 314 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OR2A12Q8NGT7 310 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 OR2L2Q8NH16 312 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 TRMT10AQ8TBZ6 339 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SPRYD4Q8WW59 207 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 ASB13Q8WXK3 278 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 PHYHIPQ92561 330 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 RAB8BQ92930 207 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 RBPMSQ93062 196 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 EXOSC8Q96B26 276 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SENP5Q96HI0 755 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 LRRC3BQ96PB8 259 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 SLC25A33Q9BSK2 321 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 PLA2G12AQ9BZM1 189 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 EGLN3Q9H6Z9 239 aa4.22□□□□□ -1.73
ATXN3-246ENST00000557030 DDX31Q9H8H2 851 aaKnown RBP4.22□□□□□ -1.73
ATXN3-246ENST00000557030 EVA1AQ9H8M9 152 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms