RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 OR6K6Q8NGW6 343 aa12.31□□□□□ -0.44
VIPAS39-208ENST00000556412 BCL2L2Q92843 193 aaPredicted RBP12.31□□□□□ -0.44
VIPAS39-208ENST00000556412 MUS81Q96NY9 551 aa12.31□□□□□ -0.44
VIPAS39-208ENST00000556412 WFIKKN1Q96NZ8 548 aa12.31□□□□□ -0.44
VIPAS39-208ENST00000556412 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
VIPAS39-208ENST00000556412 HINT3Q9NQE9 182 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-208ENST00000556412 FKBP7Q9Y680 259 aa12.31□□□□□ -0.44
VIPAS39-208ENST00000556412 FLNCQ14315 2725 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 ARHGAP21Q5T5U3 1957 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 IGLV1-36A0A0B4J1U3 117 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 SH3D21A4FU49 640 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 MPZL1O95297 269 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 OR8G3PP0DMU2 310 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 SPI1P17947 270 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 ZNF133P52736 654 aaPredicted RBP12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 AQP4P55087 323 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 TAB1Q15750 504 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 MEX3BQ6ZN04 569 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 BCDIN3DQ7Z5W3 292 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 MED12LQ86YW9 2145 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 WFDC8Q8IUA0 241 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 DHRSXQ8N5I4 330 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 BBS1Q8NFJ9 593 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 MUCL1Q96DR8 90 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 HRASLS5Q96KN8 279 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 DDOQ99489 341 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 C1QTNF6Q9BXI9 259 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 EMC7Q9NPA0 242 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 SLC17A5Q9NRA2 495 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 TENM4Q6N022 2769 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 HIVEP3Q5T1R4 2406 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 CLIC3O95833 236 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 HLA-HP01893 362 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 CD79AP11912 226 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 NPR2P20594 1047 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 LAP3P28838 519 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 KIR2DL3P43628 341 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 SLC25A1P53007 311 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 MRPS34P82930 218 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 GLO1Q04760 184 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 PIGFQ07326 219 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 TIMM23BQ5SRD1 257 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 IZUMO2Q6UXV1 221 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 C22orf34Q6ZV56 151 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 SLC16A14Q7RTX9 510 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 C17orf78Q8N4C9 275 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 TMEM163Q8TC26 289 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 ZNRF4Q8WWF5 429 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 PTP4A1Q93096 173 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 UBE2FQ969M7 185 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 ADI1Q9BV57 179 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 NELFAQ9H3P2 528 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 RASSF1Q9NS23 344 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 NDRG4Q9ULP0 352 aaKnown RBP12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 POLR1DQ9Y2S0 133 aa12.3□□□□□ -0.44
VIPAS39-208ENST00000556412 TVP23AA6NH52 213 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 PATE4P0C8F1 98 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 PPP3CBP16298 524 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 MSR1P21757 451 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 PPA1Q15181 289 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 MEP1BQ16820 701 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 UGT2A3Q6UWM9 527 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 LYPD4Q6UWN0 246 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 ZBTB46Q86UZ6 589 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 SKA3Q8IX90 412 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 HSD17B8Q92506 261 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 NABP1Q96AH0 204 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 NMNAT2Q9BZQ4 307 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 KCNN2Q9H2S1 579 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 RNF121Q9H920 327 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 SIAEQ9HAT2 523 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 POLE4Q9NR33 117 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 CRIM1Q9NZV1 1036 aa12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 H2AFY2Q9P0M6 372 aaPredicted RBP12.29□□□□□ -0.44
VIPAS39-208ENST00000556412 CASKO14936 926 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 SCG5P05408 212 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 COL8A1P27658 744 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 VHLP40337 213 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 PEX19P40855 299 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 IL5RAQ01344 420 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 APOFQ13790 326 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 SNCBQ16143 134 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 TTC23Q5W5X9 447 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 B3GLCTQ6Y288 498 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 P2RY8Q86VZ1 359 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 DEPDC4Q8N2C3 294 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 WDR31Q8NA23 367 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 OR8J1Q8NGP2 316 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 NANOS1Q8WY41 292 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 C11orf40Q8WZ69 217 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 ZMYND19Q96E35 227 aaPredicted RBP12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 PITX2Q99697 317 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 APOL4Q9BPW4 351 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 USB1Q9BQ65 265 aaKnown RBP12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 OR10A4Q9H209 315 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 DNAJC27Q9NZQ0 273 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 AASSQ9UDR5 926 aa12.28□□□□□ -0.44
VIPAS39-208ENST00000556412 AMDHD2Q9Y303 409 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms