RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 CHRNB3Q05901 458 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 PIGFQ07326 219 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 TRIM25Q14258 630 aaKnown RBP9.99□□□□□ -0.81
SLIRP-205ENST00000556310 C11orf91Q3C1V1 193 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 SLC36A2Q495M3 483 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 THEM4Q5T1C6 240 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 SLC16A14Q7RTX9 510 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 FAM122BQ7Z309 247 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 ARIH2OSQ8N7S6 290 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 HTRA1Q92743 480 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 POP5Q969H6 163 aaKnown RBP9.99□□□□□ -0.81
SLIRP-205ENST00000556310 ASB9Q96DX5 294 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 C18orf12Q96KH6 178 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 COX4I2Q96KJ9 171 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 RBP7Q96R05 134 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 SH3GL3Q99963 347 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 BDH2Q9BUT1 245 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 MAGIXQ9H6Y5 334 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 TAS2R1Q9NYW7 299 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 AURKCQ9UQB9 309 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 ADAM18Q9Y3Q7 739 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 UGT2A1Q9Y4X1 527 aa9.99□□□□□ -0.81
SLIRP-205ENST00000556310 IGKV1D-43A0A0B4J1Z2 117 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 TRIM64A6NGJ6 449 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 TRIM64BA6NI03 449 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 UNC119BA6NIH7 251 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 NDUFS7O75251 213 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 PTP4A3O75365 173 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 UBOX5O94941 541 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 SERPINA5P05154 406 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 NPR2P20594 1047 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 FPR3P25089 353 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 SERPINF1P36955 418 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 SNRPD2P62316 118 aaKnown RBP9.98□□□□□ -0.81
SLIRP-205ENST00000556310 ERVK-25P63136 954 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 SNTB2Q13425 540 aaKnown RBP9.98□□□□□ -0.81
SLIRP-205ENST00000556310 DAG1Q14118 895 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 EFNB3Q15768 340 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 ADIPOQQ15848 244 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 MESTQ5EB52 335 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 GPR139Q6DWJ6 353 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 TMEM53Q6P2H8 277 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 SLC25A47Q6Q0C1 308 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 VHLLQ6RSH7 139 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 ZER1Q7Z7L7 766 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 DHFR2Q86XF0 187 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF584Q8IVC4 421 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 CLDN22Q8N7P3 220 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 FGFBP3Q8TAT2 258 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 NABP1Q96AH0 204 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 CCDC124Q96CT7 223 aaKnown RBP9.98□□□□□ -0.81
SLIRP-205ENST00000556310 FBXO17Q96EF6 278 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 Q96M85 177 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF570Q96NI8 536 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 C1orf198Q9H425 327 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 SIAEQ9HAT2 523 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 GRHPRQ9UBQ7 328 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 GDF2Q9UK05 429 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-205ENST00000556310 TMCC3Q9ULS5 477 aa9.98□□□□□ -0.81
SLIRP-205ENST00000556310 B9A039 149 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 H7C1C5 153 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 H7C1Q1 480 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 XKRYO14609 159 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 AHCYL1O43865 530 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 OR10H3O60404 316 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 KRT36O76013 467 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 MMP7P09237 267 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-205ENST00000556310 INHBBP09529 407 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 OR4A8P0C604 315 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 PATE4P0C8F1 98 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 ZNF35P13682 527 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 NR4A1P22736 598 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 SDHAP31040 664 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 CDAP32320 146 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 IFNGR2P38484 337 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 FXYD6P3P58550 94 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 LCN6P62502 163 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 MS4A2Q01362 244 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 KRR1Q13601 381 aaKnown RBP9.97□□□□□ -0.81
SLIRP-205ENST00000556310 RAB39AQ14964 217 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 CLEC12BQ2HXU8 276 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 MST1LQ2TV78 715 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 DNAL1Q4LDG9 190 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 KRT80Q6KB66 452 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 SMARCD3Q6STE5 483 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 DNM1P46Q6ZS02 220 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 FOXL2NBQ6ZUU3 175 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 ADCK1Q86TW2 530 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 BIVMQ86UB2 503 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 FANK1Q8TC84 345 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 NSMAFQ92636 917 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 CLPTM1LQ96KA5 538 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 GPA33Q99795 319 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 TRIM15Q9C019 465 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 RNF121Q9H920 327 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 NRIP3Q9NQ35 241 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 FBXO9Q9UK97 447 aaPredicted RBP9.97□□□□□ -0.81
SLIRP-205ENST00000556310 SPEF1Q9Y4P9 236 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 LYVE1Q9Y5Y7 322 aa9.97□□□□□ -0.81
SLIRP-205ENST00000556310 PMF1-BGLAPU3KQ54 211 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms