RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 IGF2RP11717 2491 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 DNPH1O43598 174 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 ARL6IP5O75915 188 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 NEURL1O76050 574 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 VAMP5O95183 116 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 IGHG1P01857 330 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 UCHL1P09936 223 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 PSKH1P11801 424 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 ZNF43P17038 809 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 ITGA3P26006 1051 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 NANOS3P60323 173 aaKnown RBP13.13□□□□□ -0.31
VPS33B-205ENST00000556096 ADAM8P78325 824 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 IFITM3Q01628 133 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 ALKBH1Q13686 389 aaKnown RBP13.13□□□□□ -0.31
VPS33B-205ENST00000556096 RGS21Q2M5E4 152 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 YIF1BQ5BJH7 314 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 FDX2Q6P4F2 183 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 KCTD18Q6PI47 426 aaPredicted RBP13.13□□□□□ -0.31
VPS33B-205ENST00000556096 CLEC1AQ8NC01 280 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 FAM173AQ9BQD7 235 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 EMC6Q9BV81 110 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 MFRPQ9BY79 579 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 OR2B2Q9GZK3 357 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 RNF32Q9H0A6 362 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 IKZF2Q9UKS7 526 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 BOKQ9UMX3 212 aaPredicted RBP13.13□□□□□ -0.31
VPS33B-205ENST00000556096 UGT2A1Q9Y4X1 527 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 LAMA5O15230 3695 aa13.13□□□□□ -0.31
VPS33B-205ENST00000556096 UPK1BO75841 260 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 AQP8O94778 261 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 SPARCP09486 303 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 PGA4P0DJD7 388 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 PGA3P0DJD8 388 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 ZNF823P16415 610 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 RPS27P42677 84 aaKnown RBP13.12□□□□□ -0.31
VPS33B-205ENST00000556096 AGFG1P52594 562 aaKnown RBP13.12□□□□□ -0.31
VPS33B-205ENST00000556096 CAV3P56539 151 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 FMODQ06828 376 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 FOXO1Q12778 655 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 POU4F3Q15319 338 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 ZNF181Q2M3W8 571 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 DDI2Q5TDH0 399 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 SPINK14Q6IE38 97 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 Q6ZNX1 250 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 ASB18Q6ZVZ8 466 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 GPAT4Q86UL3 456 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 ZNF679Q8IYX0 411 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 OR14L1PQ8NHC6 308 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 CHPT1Q8WUD6 406 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 ACOT12Q8WYK0 555 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 MAP6Q96JE9 813 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 FOXN4Q96NZ1 517 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 AMELYQ99218 206 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 ATF6BQ99941 703 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 PDCD1LG2Q9BQ51 273 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 ABCB9Q9NP78 766 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 SLCO1C1Q9NYB5 712 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 RAXQ9Y2V3 346 aa13.12□□□□□ -0.31
VPS33B-205ENST00000556096 IGKV1D-43A0A0B4J1Z2 117 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 A0A0J9YW62 118 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 SMIM30A4D0T7 59 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 RAMP1O60894 148 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 RPP14O95059 124 aaKnown RBP13.11□□□□□ -0.31
VPS33B-205ENST00000556096 ZFPL1O95159 310 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 RFPL3SP0C7P2 107 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 CD97P48960 835 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 CLRN1P58418 232 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 PPP3R1P63098 170 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 SLC17A1Q14916 467 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 TOMM20Q15388 145 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 HIST3H3Q16695 136 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 FAM27D1Q5T7N8 215 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 MZT2AQ6P582 158 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 YRDCQ86U90 279 aaKnown RBP13.11□□□□□ -0.31
VPS33B-205ENST00000556096 GLB1L2Q8IW92 636 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 LAX1Q8IWV1 398 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 FAM83FQ8NEG4 500 aaPredicted RBP13.11□□□□□ -0.31
VPS33B-205ENST00000556096 NOXO1Q8NFA2 376 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 OR13C5Q8NGS8 318 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 NSMAFQ92636 917 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 KCTD12Q96CX2 325 aaKnown RBP13.11□□□□□ -0.31
VPS33B-205ENST00000556096 MIXL1Q9H2W2 232 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 FRRS1LQ9P0K9 344 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 DOCK10Q96BY6 2186 aa13.11□□□□□ -0.31
VPS33B-205ENST00000556096 ARPC4-TTLL3A0A0A6YYG9 625 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 ISPDA4D126 451 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 LINC01387J3KSC0 135 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 NCR1O76036 304 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 MPZL1O95297 269 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 CCR9P51686 369 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 SOX8P57073 446 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 RAC3P60763 192 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 GPR85P60893 370 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 CLN3Q13286 438 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 EIF2B1Q14232 305 aaKnown RBP13.1□□□□□ -0.31
VPS33B-205ENST00000556096 MEP1BQ16820 701 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 HBMQ6B0K9 141 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 NR2C2APQ86WQ0 139 aa13.1□□□□□ -0.31
VPS33B-205ENST00000556096 OR2M7Q8NG81 312 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms