RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 CLDN14O95500 239 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 CLIC3O95833 236 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 HRGP04196 525 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 ITGA5P08648 1049 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 GNAO1P09471 354 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 MYF6P23409 242 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 FMO3P31513 532 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 ARF1P84077 181 aaKnown RBP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 HSF2Q03933 536 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 MAD2L1BPQ15013 274 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 ETFDHQ16134 617 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 KCNMB1Q16558 191 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 KLHL12Q53G59 568 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 ANKRD16Q6P6B7 361 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 CXorf67Q86X51 503 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 STEAP2Q8NFT2 490 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 OR9Q1Q8NGQ5 310 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 FBLIM1Q8WUP2 373 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 RNASE6Q93091 150 aaKnown RBP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF837Q96EG3 531 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF582Q96NG8 517 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 TEAD3Q99594 435 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 WACQ9BTA9 647 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 HCAR1Q9BXC0 346 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 MED20Q9H944 212 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 RASSF1Q9NS23 344 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 HAO2Q9NYQ3 351 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 WARS2Q9UGM6 360 aaKnown RBP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 UGT2A1Q9Y4X1 527 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 LRRC42Q9Y546 428 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 DIDO1Q9BTC0 2240 aaKnown RBP10.96□□□□□ -0.66
SHMT2-221ENST00000555773 INTS1Q8N201 2190 aaKnown RBP10.96□□□□□ -0.66
SHMT2-221ENST00000555773 C16orf97H3BN30 126 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 M0R129 80 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 ENTPD6O75354 484 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 AGFG2O95081 481 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 FARS2O95363 451 aaKnown RBP10.95□□□□□ -0.66
SHMT2-221ENST00000555773 OR8G3PP0DMU2 310 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 SLC2A5P22732 501 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 PAX7P23759 505 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 HTR1FP30939 366 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 PYCR1P32322 319 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 FOXG1P55316 489 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-221ENST00000555773 RPS7P62081 194 aaKnown RBP10.95□□□□□ -0.66
SHMT2-221ENST00000555773 LSM6P62312 80 aaKnown RBP10.95□□□□□ -0.66
SHMT2-221ENST00000555773 CSNK2BP67870 215 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 CDK5R2Q13319 367 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 APOFQ13790 326 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 LCN1P1Q5VSP4 162 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 FAM27BQ5VT28 67 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 STAC2Q6ZMT1 411 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 ZNF813Q6ZN06 617 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 BHLHA15Q7RTS1 189 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-221ENST00000555773 SSX8Q7RTT4 187 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 DPPA2Q7Z7J5 298 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 P2RY8Q86VZ1 359 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 C17orf78Q8N4C9 275 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 SLC22A24Q8N4F4 322 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 OR1K1Q8NGR3 316 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 BCL2L2Q92843 193 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-221ENST00000555773 KISS1RQ969F8 398 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-221ENST00000555773 KCNN2Q9H2S1 579 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 NELFAQ9H3P2 528 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 SEC61A2Q9H9S3 476 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 POLE4Q9NR33 117 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 TMEM38BQ9NVV0 291 aa10.95□□□□□ -0.66
SHMT2-221ENST00000555773 ARHGAP21Q5T5U3 1957 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 A0A1W2PPL8 197 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 FAM90A27PA6NNH2 459 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 FAM171A2A8MVW0 826 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 WBP4O75554 376 aaKnown RBP10.94□□□□□ -0.66
SHMT2-221ENST00000555773 LYZL6O75951 148 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 HLA-DQA2P01906 255 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 GYPBP06028 91 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 CLUP10909 449 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 PPP3CBP16298 524 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 MSR1P21757 451 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 IL32P24001 234 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 GSTT1P30711 240 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 CDAP32320 146 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 CDH11P55287 796 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 CXCR4P61073 352 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 FAM27E3Q08E93 113 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 GABRA6Q16445 453 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 SGCAQ16586 387 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 LINC01590Q5TEZ4 76 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 C9orf135Q5VTT2 229 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 BCDIN3DQ7Z5W3 292 aaKnown RBP10.94□□□□□ -0.66
SHMT2-221ENST00000555773 BBS1Q8NFJ9 593 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 SLC26A10Q8NG04 563 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 OR51L1Q8NGJ5 315 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 OR6K6Q8NGW6 343 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 ZNRF4Q8WWF5 429 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 MARCH7Q9H992 704 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 OBP2BQ9NPH6 170 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 GALNT8Q9NY28 637 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 KCNG2Q9UJ96 466 aa10.94□□□□□ -0.66
SHMT2-221ENST00000555773 RPL36Q9Y3U8 105 aaKnown RBP10.94□□□□□ -0.66
SHMT2-221ENST00000555773 RELNP78509 3460 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms