RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 TAB1Q15750 504 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 DEFB113Q30KQ7 82 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 KLHL26Q53HC5 615 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 PYDC2Q56P42 97 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 SLC35F1Q5T1Q4 408 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 FNDC7Q5VTL7 733 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 GPR139Q6DWJ6 353 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 DGAT2L6Q6ZPD8 337 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 SLC29A4Q7RTT9 530 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 JAZF1Q86VZ6 243 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 SNX29P2Q8IUI4 249 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 MISPQ8IVT2 679 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 TMEM99Q8N816 258 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 C17orf47Q8NEP4 570 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 NFAM1Q8NET5 270 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-216ENST00000554975 OR51A7Q8NH64 312 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 HPS1Q92902 700 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 SMIM19Q96E16 107 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 ZC3HAV1LQ96H79 300 aaKnown RBP9.96□□□□□ -0.82
SHMT2-216ENST00000554975 SDHCQ99643 169 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-216ENST00000554975 MRI1Q9BV20 369 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 OR8D2Q9GZM6 311 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 MIXL1Q9H2W2 232 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 TP63Q9H3D4 680 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-216ENST00000554975 CRIM1Q9NZV1 1036 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 HIF3AQ9Y2N7 669 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 YARS2Q9Y2Z4 477 aaKnown RBP9.96□□□□□ -0.82
SHMT2-216ENST00000554975 CLDN16Q9Y5I7 305 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 NPFFR2Q9Y5X5 522 aa9.96□□□□□ -0.82
SHMT2-216ENST00000554975 TRAV1-2A0A0B4J238 106 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 ZNF879B4DU55 563 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 TFECO14948 347 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-216ENST00000554975 TO15178 435 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 LALBAP00709 142 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 KRT8P05787 483 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 FUT1P19526 365 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 AZGP1P25311 298 aaKnown RBP9.95□□□□□ -0.82
SHMT2-216ENST00000554975 CASP3P42574 277 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 NR4A2P43354 598 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 MAP2K3P46734 347 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 CCR4P51679 360 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 TPTEP56180 551 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 SLC37A1P57057 533 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 OR2B6P58173 313 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 MLF1P58340 268 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 SKP2Q13309 424 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 QPRTQ15274 297 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 VASNQ6EMK4 673 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 RPL22L1Q6P5R6 122 aaKnown RBP9.95□□□□□ -0.82
SHMT2-216ENST00000554975 CNIH2Q6PI25 160 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 ARL9Q6T311 187 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 ARSKQ6UWY0 536 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 NANOGNBQ7Z5D8 188 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 KCTD20Q7Z5Y7 419 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 ATG4DQ86TL0 474 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-216ENST00000554975 SLC35F2Q8IXU6 374 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 CIARTQ8N365 385 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-216ENST00000554975 TMEM156Q8N614 296 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 ZFP41Q8N8Y5 198 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 OR52E2Q8NGJ4 325 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 PHOSPHO1Q8TCT1 267 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 C4orf36Q96KX1 117 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 CMTM3Q96MX0 182 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 SNX18Q96RF0 628 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 LAT2Q9GZY6 243 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 FKRPQ9H9S5 495 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 NRIP3Q9NQ35 241 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 PLSCR2Q9NRY7 297 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 IL20RAQ9UHF4 553 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 TBC1D24Q9ULP9 559 aa9.95□□□□□ -0.82
SHMT2-216ENST00000554975 ANK3Q12955 4377 aaKnown RBP9.95□□□□□ -0.82
SHMT2-216ENST00000554975 CD8B2A6NJW9 211 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 FAM25AB3EWG3 89 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 FAM25CB3EWG5 89 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 FAM25GB3EWG6 89 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 PDCD5O14737 125 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 ZFAND5O76080 213 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 GLCEO94923 617 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 UTS2O95399 124 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 NTN1O95631 604 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 TXNDC12O95881 172 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 RENP00797 406 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 MT-ATP6P00846 226 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 CD14P08571 375 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 CLEC2LP0C7M8 214 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 CD8BP10966 210 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 SLC2A2P11168 524 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-216ENST00000554975 PGCP20142 388 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 MAPK3P27361 379 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-216ENST00000554975 SDHAP31040 664 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 CD79BP40259 229 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 TGM4P49221 684 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 CYB561P49447 251 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 BLVRAP53004 296 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 PLCXD2Q0VAA5 305 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 IL18Q14116 193 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 CDK5R1Q15078 307 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 CDONQ4KMG0 1287 aa9.94□□□□□ -0.82
SHMT2-216ENST00000554975 DMKNQ6E0U4 476 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-216ENST00000554975 GDPD3Q7L5L3 318 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms