RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ZNF639	Q9UID6	485 aa		4.41	□□□□□ -1.7
PSMC6-208	ENST00000554956	PHF11	Q9UIL8	331 aa		4.41	□□□□□ -1.7
PSMC6-208	ENST00000554956	ZNF225	Q9UK10	706 aa		4.41	□□□□□ -1.7
PSMC6-208	ENST00000554956	BLOC1S6	Q9UL45	172 aa		4.41	□□□□□ -1.7
PSMC6-208	ENST00000554956	RNF150	Q9ULK6	438 aa		4.41	□□□□□ -1.7
PSMC6-208	ENST00000554956	SAR1B	Q9Y6B6	198 aa		4.41	□□□□□ -1.7
PSMC6-208	ENST00000554956	NIPBL	Q6KC79	2804 aa	eCLIP	4.4	□□□□□ -1.7
PSMC6-208	ENST00000554956	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.4	□□□□□ -1.7
PSMC6-208	ENST00000554956	FOXE1	O00358	373 aa	Predicted RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	SELENOF	O60613	162 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	SNX4	O95219	450 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	NGF	P01138	241 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CPM	P14384	443 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CPN1	P15169	458 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	NT5E	P21589	574 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CRABP2	P29373	138 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	SERPINB1	P30740	379 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	SPR	P35270	261 aa	Predicted RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	HSD17B3	P37058	310 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	FEN1	P39748	380 aa	Known RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	MAGEA4	P43358	317 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	EMD	P50402	254 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	LHX2	P50458	406 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	MAPK12	P53778	367 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	PLTP	P55058	493 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CLDN18	P56856	261 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	B3GALT5-AS1	P59052	145 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	ERVK11-1	P61568	191 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	C2orf54	Q08AI8	447 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	KIAA1644	Q3SXP7	199 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	ELFN2	Q5R3F8	820 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR5M10	Q6IEU7	315 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR52E8	Q6IFG1	317 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CORO6	Q6QEF8	472 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	NHLRC1	Q6VVB1	395 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	NPSR1	Q6W5P4	371 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	BIVM	Q86UB2	503 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	KRTAP7-1	Q8IUC3	87 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	METTL4	Q8N3J2	472 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	ADAD2	Q8NCV1	583 aa	Known RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	SPATA4	Q8NEY3	305 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR4K14	Q8NGD5	310 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR52R1	Q8NGF1	315 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR1J4	Q8NGS1	313 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	RHEBL1	Q8TAI7	183 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZPLD1	Q8TCW7	415 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	RNF138	Q8WVD3	245 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CDKL2	Q92772	493 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	TM4SF18	Q96CE8	201 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	STARD4	Q96DR4	205 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	OMA1	Q96E52	524 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CNRIP1	Q96F85	164 aa	Predicted RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	C18orf12	Q96KH6	178 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	ART5	Q96L15	291 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZNF681	Q96N22	645 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	WFIKKN1	Q96NZ8	548 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	SECISBP2	Q96T21	854 aa	Known RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	HBEGF	Q99075	208 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	NAPG	Q99747	312 aa	Predicted RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	RBM24	Q9BX46	236 aa	Known RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	OR2B2	Q9GZK3	357 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CALHM2	Q9HA72	323 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	NMRAL1	Q9HBL8	299 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	LYAR	Q9NX58	379 aa	Known RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	FLRT3	Q9NZU0	649 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	TXNDC16	Q9P2K2	825 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	B3GAT1	Q9P2W7	334 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	MTRF1L	Q9UGC7	380 aa	Known RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	PCTP	Q9UKL6	214 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	ACOT9	Q9Y305	439 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	PLLP	Q9Y342	182 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	SPACA6	W5XKT8	324 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	CSPG4	Q6UVK1	2322 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	NCKAP5	O14513	1909 aa		4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	FLNA	P21333	2647 aa	Known RBP	4.4	□□□□□ -1.71
PSMC6-208	ENST00000554956	PHF3	Q92576	2039 aa	Known RBP	4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	JMJD1C	Q15652	2540 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	MAP1A	P78559	2803 aa	Predicted RBP	4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	TRAV24	A0A0B4J272	114 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956		A0A1W2PN81	502 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956		A0A1W2PNV4	684 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	TP53I11	O14683	189 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	EIF3H	O15372	352 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	ZSCAN12	O43309	604 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	TXNL1	O43396	289 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	SEMA3D	O95025	777 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	KLHL2	O95198	593 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	RCBTB2	O95199	551 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	FRMD6-AS1	P0C7T7	363 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	CT45A8	P0DMV1	189 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	CT45A9	P0DMV2	189 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	GFAP	P14136	432 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	LBP	P18428	481 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	PIK3R1	P27986	724 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	OPRM1	P35372	400 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	CHRNA7	P36544	502 aa		4.39	□□□□□ -1.71
PSMC6-208	ENST00000554956	MAGEA12	P43365	314 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms