RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 GSG1Q2KHT4 349 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 SLC35F1Q5T1Q4 408 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 FAM205BPQ63HN1 556 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 CCDC121Q6ZUS5 278 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 FOXL2NBQ6ZUU3 175 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 SSX8Q7RTT4 187 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 PAQR4Q8N4S7 273 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-214ENST00000554928 FAM169BQ8N8A8 192 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 OR4Q3Q8NH05 313 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 FBXO17Q96EF6 278 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 RBP7Q96R05 134 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 FEVQ99581 238 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 FOXC2Q99958 501 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 IFT27Q9BW83 186 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 SYT4Q9H2B2 425 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 CXXC4Q9H2H0 198 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 FN3KQ9H479 309 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 SMURF2Q9HAU4 748 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 EMC7Q9NPA0 242 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 ARMC1Q9NVT9 282 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 POU2F3Q9UKI9 436 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 MGAT4BQ9UQ53 548 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 CDH10Q9Y6N8 788 aa10.71□□□□□ -0.69
SYNE2-214ENST00000554928 A0A1W2PPL8 197 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 MGRN1O60291 552 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 NDUFS7O75251 213 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 CCL2P13500 99 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 LAP3P28838 519 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 SLC6A6P31641 620 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 ARR3P36575 388 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 IFNGR2P38484 337 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 RASSF2P50749 326 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF84P51523 738 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 MRPS34P82930 218 aaKnown RBP10.7□□□□□ -0.7
SYNE2-214ENST00000554928 ENDOGQ14249 297 aaKnown RBP10.7□□□□□ -0.7
SYNE2-214ENST00000554928 THEM4Q5T1C6 240 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 C1orf146Q5VVC0 180 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 GPR139Q6DWJ6 353 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 VHLLQ6RSH7 139 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 RASSF6Q6ZTQ3 369 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 SLC16A14Q7RTX9 510 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 CCDC36Q8IYA8 594 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 SDR9C7Q8NEX9 313 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 OR4K13Q8NH42 304 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 GIPC3Q8TF64 312 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 ZNRF4Q8WWF5 429 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 PERPQ96FX8 193 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 NMNAT3Q96T66 252 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 DHRS9Q9BPW9 319 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 TRAF4Q9BUZ4 470 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-214ENST00000554928 DGCR6LQ9BY27 220 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 NUAK2Q9H093 628 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 RERGLQ9H628 205 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 DENND2DQ9H6A0 471 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-214ENST00000554928 VSX1Q9NZR4 365 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-214ENST00000554928 PDP1Q9P0J1 537 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-214ENST00000554928 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.7□□□□□ -0.7
SYNE2-214ENST00000554928 STX18Q9P2W9 335 aaKnown RBP10.7□□□□□ -0.7
SYNE2-214ENST00000554928 REV1Q9UBZ9 1251 aa10.7□□□□□ -0.7
SYNE2-214ENST00000554928 CELSR1Q9NYQ6 3014 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 VPS13CQ709C8 3753 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 USF3Q68DE3 2245 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 OR6C68A6NDL8 312 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 FAM171A2A8MVW0 826 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 OVOL3O00110 214 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 BHLHE40O14503 412 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 XKRYO14609 159 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 ARPC3O15145 178 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 SLC16A7O60669 478 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 UBL3O95164 117 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF35P13682 527 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 APEHP13798 732 aaKnown RBP10.69□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF32P17041 273 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 TTKP33981 857 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 FABP6P51161 128 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 RPS6KA3P51812 740 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 C3orf36Q3SXR2 165 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF362Q5T0B9 420 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-214ENST00000554928 C11orf71Q6IPW1 123 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 KRT80Q6KB66 452 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 LEG1Q6P5S2 330 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 DTX2Q86UW9 622 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 IQCF1Q8N6M8 205 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 CPEB3Q8NE35 698 aaKnown RBP10.69□□□□□ -0.7
SYNE2-214ENST00000554928 WFDC11Q8NEX6 87 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 AKR7LQ8NHP1 331 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 DDOQ99489 341 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 TSSK6Q9BXA6 273 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 SIAEQ9HAT2 523 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 POLE4Q9NR33 117 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 BEX4Q9NWD9 120 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-214ENST00000554928 IL20Q9NYY1 176 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 DNAJB9Q9UBS3 223 aa10.69□□□□□ -0.7
SYNE2-214ENST00000554928 COA3Q9Y2R0 106 aaPredicted RBP10.69□□□□□ -0.7
SYNE2-214ENST00000554928 DSCAMO60469 2012 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 PLCE1Q9P212 2302 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 ZNF469Q96JG9 3925 aaPredicted RBP10.68□□□□□ -0.7
SYNE2-214ENST00000554928 IGLV1-36A0A0B4J1U3 117 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 GNGT2O14610 69 aa10.68□□□□□ -0.7
SYNE2-214ENST00000554928 GPRIN2O60269 458 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms