RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 FFAR1O14842 300 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 CIB2O75838 187 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 SAGP10523 405 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-213ENST00000554508 USF1P22415 310 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-213ENST00000554508 ERFP50548 548 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 CTXN1P60606 82 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 RPL27P61353 136 aaKnown RBP7.53□□□□□ -1.2
ACTN1-213ENST00000554508 VLDLRP98155 873 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 PLP2Q04941 152 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 RUNX1T1Q06455 604 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 RAB39AQ14964 217 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 ZSCAN26Q16670 478 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 TMEM249Q2WGJ8 235 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 THEM4Q5T1C6 240 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 C1orf146Q5VVC0 180 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 FAM205BPQ63HN1 556 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 KRT80Q6KB66 452 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 ASRGL1Q7L266 308 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 RRM2BQ7LG56 351 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 SLC16A14Q7RTX9 510 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 SPATA24Q86W54 205 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 NRMQ8IXM6 262 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 SYT14Q8NB59 555 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 OR4K5Q8NGD3 323 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 OR1J2Q8NGS2 313 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 MOSPD2Q8NHP6 518 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 FGFBP3Q8TAT2 258 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 ACOT11Q8WXI4 607 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-213ENST00000554508 MRPL24Q96A35 216 aaKnown RBP7.53□□□□□ -1.2
ACTN1-213ENST00000554508 RBP7Q96R05 134 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 KCNK17Q96T54 332 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 SH3GL3Q99963 347 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 ALG12Q9BV10 488 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 MS4A5Q9H3V2 200 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 SIAEQ9HAT2 523 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 MAN2C1Q9NTJ4 1040 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 RHCGQ9UBD6 479 aa7.53□□□□□ -1.2
ACTN1-213ENST00000554508 FAM32AQ9Y421 112 aaKnown RBP7.53□□□□□ -1.2
ACTN1-213ENST00000554508 A0A087WUU8 490 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 IQCMA0A1B0GVH7 501 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 SH3PXD2BA1X283 911 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 A6NIZ1 184 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 A8MV72 311 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 EFCAB9A8MZ26 197 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 VWC2LB2RUY7 222 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 SYNGR3O43761 229 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 GPRIN2O60269 458 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 PIP5K1CO60331 668 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 CRLF1O75462 422 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 LY6HO94772 140 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 DIRAS1O95057 198 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 PRSS23O95084 383 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 SNAP29O95721 258 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 IGHMP01871 453 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 FABP3P05413 133 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 PATE4P0C8F1 98 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 ITGA2P17301 1181 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 MAKP20794 623 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 GUCA1AP43080 201 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 NR4A2P43354 598 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 RAP1BP61224 184 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 RAP1AP62834 184 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 MRPS34P82930 218 aaKnown RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 MYBPC1Q00872 1141 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 FAM98BQ52LJ0 330 aaKnown RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 CYB5R2Q6BCY4 276 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 SLC25A47Q6Q0C1 308 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 ZNF730Q6ZMV8 503 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 TMPRSS11FQ6ZWK6 438 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 MBOAT2Q6ZWT7 520 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 OAFQ86UD1 273 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 HIPK1Q86Z02 1210 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 ZNF584Q8IVC4 421 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 SVOPLQ8N434 492 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 SLC30A7Q8NEW0 376 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 HDAC2Q92769 488 aaKnown RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 POP5Q969H6 163 aaKnown RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 NMD3Q96D46 503 aaKnown RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 RSRC1Q96IZ7 334 aaKnown RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 C7orf34Q96L11 122 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 NDEL1Q9GZM8 345 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 NMNAT1Q9HAN9 279 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 CDH20Q9HBT6 801 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 DYNLRB1Q9NP97 96 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 YAE1D1Q9NRH1 226 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 ZNF346Q9UL40 294 aaKnown RBP7.52□□□□□ -1.21
ACTN1-213ENST00000554508 AURKCQ9UQB9 309 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 TMEM5Q9Y2B1 443 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 ENPP4Q9Y6X5 453 aa7.52□□□□□ -1.21
ACTN1-213ENST00000554508 DHRS12A0PJE2 317 aa7.51□□□□□ -1.21
ACTN1-213ENST00000554508 ERICH4A6NGS2 130 aa7.51□□□□□ -1.21
ACTN1-213ENST00000554508 AQP12BA6NM10 295 aa7.51□□□□□ -1.21
ACTN1-213ENST00000554508 M0R233 179 aa7.51□□□□□ -1.21
ACTN1-213ENST00000554508 AHCYL1O43865 530 aa7.51□□□□□ -1.21
ACTN1-213ENST00000554508 SLC2A10O95528 541 aa7.51□□□□□ -1.21
ACTN1-213ENST00000554508 SEMG1P04279 462 aa7.51□□□□□ -1.21
ACTN1-213ENST00000554508 ADRA2AP08913 450 aa7.51□□□□□ -1.21
ACTN1-213ENST00000554508 MMP7P09237 267 aaPredicted RBP7.51□□□□□ -1.21
ACTN1-213ENST00000554508 DAOP14920 347 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms