RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 WDR76Q9H967 626 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ISYNA1Q9NPH2 558 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ZFHX4Q86UP3 3567 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 RIF1Q5UIP0 2472 aaKnown RBP10.53□□□□□ -0.72
SHMT2-212ENST00000554467 FRYQ5TBA9 3013 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 TRAV36DV7A0A075B6V5 113 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ARPC4-TTLL3A0A0A6YYG9 625 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 SIGLEC5O15389 551 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-212ENST00000554467 EVX1P49640 407 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 POLR2HP52434 150 aaKnown RBP10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ZFP36L1Q07352 338 aaKnown RBP10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ODF4Q2M2E3 257 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 LINC01590Q5TEZ4 76 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 CEACAM19Q7Z692 300 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF416Q9BWM5 594 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 MED28Q9H204 178 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 LDAHQ9H6V9 325 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 METTL7AQ9H8H3 244 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 A0A1B0GTH9 108 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF254O75437 659 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 DUSP3P51452 185 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-212ENST00000554467 FOXF1Q12946 379 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 ETFDHQ16134 617 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 FAM198BQ6UWH4 519 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 SCMH1Q96GD3 660 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 DMRTA2Q96SC8 542 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 NMNAT2Q9BZQ4 307 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 ANKRD10Q9NXR5 420 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 NCDNQ9UBB6 729 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 CYB5R1Q9UHQ9 305 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 EXPH5Q8NEV8 1989 aa10.52□□□□□ -0.72
SHMT2-212ENST00000554467 CPAMD8Q8IZJ3 1885 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 A0A0B4J203 849 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 RGS9O75916 674 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 ZFAND5O76080 213 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 POU3F2P20265 443 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 NUP62P37198 522 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 LGALS3BPQ08380 585 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 IL11RAQ14626 422 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 OR7A5Q15622 319 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 WDFY1Q8IWB7 410 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 HGDQ93099 445 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 RASL10BQ96S79 203 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 JAM3Q9BX67 310 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 RNF32Q9H0A6 362 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 EMC7Q9NPA0 242 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 FANCFQ9NPI8 374 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 MRPL39Q9NYK5 338 aaKnown RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 HAO2Q9NYQ3 351 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 FBXL2Q9UKC9 423 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 PCDHGA9Q9Y5G4 932 aaKnown RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 RTTNQ86VV8 2226 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 KLF7O75840 302 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 HLA-DQA2P01906 255 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 OR8G3PP0DMU2 310 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 ELK1P19419 428 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 FGF9P31371 208 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 CCKBRP32239 447 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 SRP9P49458 86 aaKnown RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 PPP3R1P63098 170 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 ACKR1Q16570 336 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 NHLRC3Q5JS37 347 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 TMEM205Q6UW68 189 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 LRRC69Q6ZNQ3 347 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 C17orf107Q6ZR85 190 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 GRINAQ7Z429 371 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 OR2T4Q8NH00 348 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 NUBPLQ8TB37 319 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 ABHD4Q8TB40 342 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 ATF6BQ99941 703 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 TSPAN10Q9H1Z9 355 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-212ENST00000554467 PPP4R1LQ9P1A2 415 aa10.52□□□□□ -0.73
SHMT2-212ENST00000554467 EEF1E1O43324 174 aaKnown RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ITGA10O75578 1167 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 RGS11O94810 467 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 EDNRAP25101 427 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ACSM1Q08AH1 577 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 PCOLCEQ15113 449 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 DPY19L4Q7Z388 723 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 OR6N2Q8NGY6 317 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 PGLYRP3Q96LB9 341 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 FKRPQ9H9S5 495 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 NKIRAS2Q9NYR9 191 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ZFHX2Q9C0A1 2572 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ANKRD61A6NGH8 418 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 A8MVM7 634 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 DNASE2O00115 360 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 GLCEO94923 617 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 AKR7A3O95154 331 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 AHSA1O95433 338 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ACTC1P68032 377 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ACTA1P68133 377 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 MEP1BQ16820 701 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 FAM69AQ5T7M9 428 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 RGS7BPQ6MZT1 257 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-212ENST00000554467 ESPNLQ6ZVH7 1005 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 SLC35D2Q76EJ3 337 aa10.51□□□□□ -0.73
SHMT2-212ENST00000554467 MAMDC2Q7Z304 686 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms