RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 GUCA1AP43080 201 aaPredicted RBP20.19■□□□□ 0.82
NEK9-203ENST00000553945 NKX6-1P78426 367 aaPredicted RBP20.19■□□□□ 0.82
NEK9-203ENST00000553945 RAB39AQ14964 217 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 SLC36A2Q495M3 483 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 AGAP6Q5VW22 663 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 TMEM53Q6P2H8 277 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 ZNF620Q6ZNG0 422 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 IL17RDQ8NFM7 739 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 GTPBP3Q969Y2 492 aaKnown RBP20.19■□□□□ 0.82
NEK9-203ENST00000553945 ZNF75AQ96N20 296 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 TRAF4Q9BUZ4 470 aaPredicted RBP20.19■□□□□ 0.82
NEK9-203ENST00000553945 IFT27Q9BW83 186 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 KCNN2Q9H2S1 579 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 MMADHCQ9H3L0 296 aaPredicted RBP20.19■□□□□ 0.82
NEK9-203ENST00000553945 YY1AP1Q9H869 796 aa20.19■□□□□ 0.82
NEK9-203ENST00000553945 IGHV2OR16-5A0A0B4J2B6 119 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 AHCYL1O43865 530 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 TMCC2O75069 709 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 TXNDC12O95881 172 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 CD8AP01732 235 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 APEHP13798 732 aaKnown RBP20.18■□□□□ 0.82
NEK9-203ENST00000553945 PTH2RP49190 550 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 ZNF544Q6NX49 715 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 DPPA2Q7Z7J5 298 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 LRRC75A-AS1Q8N1F1 130 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 NABP1Q96AH0 204 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 EGLN3Q9H6Z9 239 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 FBXL3Q9UKT7 428 aa20.18■□□□□ 0.82
NEK9-203ENST00000553945 MGRN1O60291 552 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 FKBP6O75344 327 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 CBX1P83916 185 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 HGFACQ04756 655 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 ETFDHQ16134 617 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 VHLLQ6RSH7 139 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 CCDC121Q6ZUS5 278 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 PTCHD4Q6ZW05 846 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 ADCK1Q86TW2 530 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 DTX2Q86UW9 622 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 MUC15Q8N387 334 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 OR4F15Q8NGB8 312 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 OR10G2Q8NGC3 310 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 GSX2Q9BZM3 304 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 RERGLQ9H628 205 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 CDH10Q9Y6N8 788 aa20.17■□□□□ 0.82
NEK9-203ENST00000553945 IMPA2O14732 288 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 SERPINA5P05154 406 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 APOBEC3AP31941 199 aaPredicted RBP20.16■□□□□ 0.82
NEK9-203ENST00000553945 CDKN1AP38936 164 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 CDKN2AP42771 156 aaKnown RBP20.16■□□□□ 0.82
NEK9-203ENST00000553945 C1orf146Q5VVC0 180 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 FOXL2NBQ6ZUU3 175 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 SLCO4A1Q96BD0 722 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 SYT4Q9H2B2 425 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 CCNB1IP1Q9NPC3 277 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 CA10Q9NS85 328 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 CBLN4Q9NTU7 201 aa20.16■□□□□ 0.82
NEK9-203ENST00000553945 ZNF701Q9NV72 531 aaPredicted RBP20.16■□□□□ 0.82
NEK9-203ENST00000553945 OVOL3O00110 214 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 SLC16A7O60669 478 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 E2F6O75461 281 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 CTLA4P16410 223 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 LAP3P28838 519 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 NOS3P29474 1203 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 ADAM8P78325 824 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 GK3PQ14409 553 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 CLEC12AQ5QGZ9 265 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 RPL13AP3Q6NVV1 102 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 RASSF6Q6ZTQ3 369 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 JAZF1Q86VZ6 243 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 LURAP1LQ8IV03 231 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 ZNF584Q8IVC4 421 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 PAPD5Q8NDF8 572 aaKnown RBP20.15■□□□□ 0.82
NEK9-203ENST00000553945 OR52L1Q8NGH7 329 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 GIPC3Q8TF64 312 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 FOXN4Q96NZ1 517 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 VSX1Q9NZR4 365 aaPredicted RBP20.15■□□□□ 0.82
NEK9-203ENST00000553945 PRRC2AP48634 2157 aaKnown RBP20.15■□□□□ 0.82
NEK9-203ENST00000553945 ITPR3Q14573 2671 aa20.15■□□□□ 0.82
NEK9-203ENST00000553945 ARPC3O15145 178 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 KHDRBS3O75525 346 aaKnown RBP20.14■□□□□ 0.81
NEK9-203ENST00000553945 MMP7P09237 267 aaPredicted RBP20.14■□□□□ 0.81
NEK9-203ENST00000553945 PAX1P15863 534 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 MSR1P21757 451 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 ATP5J2P56134 94 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 PLP2Q04941 152 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 Q5PR19 223 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 FAM27BQ5VT28 67 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 KRT80Q6KB66 452 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 LEG1Q6P5S2 330 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 TMEM179BQ7Z7N9 219 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 NUP37Q8NFH4 326 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 OR4K13Q8NH42 304 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 FBXO17Q96EF6 278 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 TRMT61AQ96FX7 289 aaKnown RBP20.14■□□□□ 0.81
NEK9-203ENST00000553945 FEVQ99581 238 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 DGCR6LQ9BY27 220 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 GRIP2Q9C0E4 1043 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 NUAK2Q9H093 628 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 POLE4Q9NR33 117 aa20.14■□□□□ 0.81
NEK9-203ENST00000553945 TBC1D23Q9NUY8 699 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms